Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3447 |
Symbol | |
ID | 4898478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 517079 |
End bp | 518701 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640114044 |
Product | putative monovalent cation/H+ antiporter subunit D |
Protein accession | YP_001045312 |
Protein GI | 126464199 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.471673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCTC ACCATCTCAT CGTTGCCCCG ATCCTCATCC CGTTCGTCGC GGGGGCGCTG ATGCTGCTCT ACGACGACCG GCAGCGGAAG GCGAAGGTCG CGATCTCGGT CGGATCGACG GTGGCGCTTC TTCTGGTGGC GGCAGAGCTT CTGGCGGGGT CAAAGGGCAA CGCGGCCTCG GGCGGCAACG ACATCGGCTT CTACCTGCTC GGAGACTGGG CGGTGCCCTT CGGCATCGCG CTGGTGATCG ACCGGCTCTC GGCGCTGATG CTGCTGCTGA CGGCGCTGCT GGCGATCCCG ACGCTGCTCT ATGCCTCGGC CGGCTGGCAC CGGCAGGGCA AGCACTTCCA TTCGCTGTTC CAGTTCCTGC TGATGGGGCT GAACGGGGCC TTCCTGACCG GCGACCTCTT CAACCTCTTC GTCTTCTTCG AGGTGCTGCT CGCGGCCTCC TACGGGCTGC TCCTGCACGG GTCGGGGCAG CTGCGCATCC GGGCGGGGCT GCATTACATC GCGATCAATC TCGCGGCCTC GCTGCTGTTC CTGATCGGGG TCAGCCTGAT CTACGGCGTG ACCGGCACGC TCAACATGGC GCATCTGGCG CGGATCGTGC CGACGCTGCC CGAGGCCGAC CTGCCGATCC TGCATGCCGG AGCGGCGCTT CTGGGGCTTG CATTCCTCGT GAAGGCGGGG ATCTGGCCGC TCTCCTTCTG GCTGCCCACC GCCTACATGG CGGGCGCGGC TCCGGTTGCG GCCATGTTCG CCATCATGAC CAAGGTGGGC GTCTATGTCA TCCTGCGGGT CTCGATGCTG CTCTTCGGCC CGGCGGCCGC CGCCTCCGCG GGCTTCGGAT CGGGCGTGCT GATCGCGGGC GGCATGGCCA CCGTCGCCTT CGGCCTGCTG GGCGTGCTGG CCTCGCAGGG GCTCGGACGG ATGACGGCCA ATATGGTGCT GATCTCGTCG GGCACCGTGC TGGGCGTCGT GGGCTTCGCG CTCGCGGGCG GCGGACCCGA GATGCTGGGC GGCGCGCTCT ATTATCTCGT CAGCTCGACC CTCGCCACCG GGGCGCTCTT CCTGCTCATC GAGCCGATGA GCCGCGAGGA GGGCGGCATC GCCGCCATGC TGGCCCTGAC CGCCGATGCC TACGGGCTCG ACGAGGCCGA GGAGGACGAG CCCGAGGTGG GTCTCGCCAT CCCGGGCACG CTGACCGTGC TGGGGCTGAG CTTCGGCGCC TGTGTCCTCG CGCTGGCGGG CCTGCCGCCG CTGTCGGGCT TCATCGGCAA GATCGCGATG CTGGCCCCCC TGCTGGCCGC GCCGGGCTTC GATCCGCTCC TCGGCTGGGC CTTCCTGTCG CTCCTGTTCC TTGCGGGGTT CGCCACGCTG ATCGGCCTCG TGCGGATCGG CATCCAGACC TTCTGGGCTA CCGACGGCTC GGTGCCGAAG GTGCTCGCGC TCGAGATCGC GCCGGTGCTG GGGCTGATCG CGCTGCTCGT CACGCTGACC GTCCGGGCCG AGGATACGCT GCGCTACATG CAGGCCACCG CGCGCGCGCT GCACGAGCCC GCGATCTATG CCGACGGGGT CTTCGCCGCC CCGCGCGTCA CCGAGGGGAG CGCCGCCCCA TGA
|
Protein sequence | MSAHHLIVAP ILIPFVAGAL MLLYDDRQRK AKVAISVGST VALLLVAAEL LAGSKGNAAS GGNDIGFYLL GDWAVPFGIA LVIDRLSALM LLLTALLAIP TLLYASAGWH RQGKHFHSLF QFLLMGLNGA FLTGDLFNLF VFFEVLLAAS YGLLLHGSGQ LRIRAGLHYI AINLAASLLF LIGVSLIYGV TGTLNMAHLA RIVPTLPEAD LPILHAGAAL LGLAFLVKAG IWPLSFWLPT AYMAGAAPVA AMFAIMTKVG VYVILRVSML LFGPAAAASA GFGSGVLIAG GMATVAFGLL GVLASQGLGR MTANMVLISS GTVLGVVGFA LAGGGPEMLG GALYYLVSST LATGALFLLI EPMSREEGGI AAMLALTADA YGLDEAEEDE PEVGLAIPGT LTVLGLSFGA CVLALAGLPP LSGFIGKIAM LAPLLAAPGF DPLLGWAFLS LLFLAGFATL IGLVRIGIQT FWATDGSVPK VLALEIAPVL GLIALLVTLT VRAEDTLRYM QATARALHEP AIYADGVFAA PRVTEGSAAP
|
| |