| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3359 |
|---|
| Symbol | |
|---|
| ID | 4898941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 409800 |
|---|
| End bp | 411290 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640113958 |
|---|
| Product | lambda family phage portal protein |
|---|
| Protein accession | YP_001045227 |
|---|
| Protein GI | 126464114 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5511] Bacteriophage capsid protein |
|---|
| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.591009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGA CCTTCCTGCG CCGGCTCGGC GCCTGGGTCG GCGGGTTCGA TGCGGGCCTC
GCCAACCGGC GCCTGCGCGG CTTCCGCCCC GCACGCGCCC ATGTGAATGC GCTTCTCGCC
GCGGCCGGCC CCGACATGAA CGCCCGCGCG CGCTACCTCG TGCGCAACAA CGGCTATGCC
CAGGGCGCGC TCGACAGCTG GGCCGCGAAC ACGGTCGGCA CCGGGGTGAA GCCCTCCTCG
CTCATCGCGG CGCCGGCGCG GAAGGCAGCC CTCCAGCGGC TCTGGCAGGA CTGGACCGAC
GAGGCGGATG CCGAGGGCGT GACCGACTTC TACGGCCTGC AGCGCCGCAT CGCGCGCGAG
TTCTTCCTCA CGGGCGAATG CTTCGTGCGC CTGCGCGCGC GGAGGCCCGG CGACGGGCTC
ACGGTGCCGC TCCAGCTCCA GTGCCTGCCC TCCGAGATGC TGCCGATCGG CCGGACCGAG
GTGCTGGGCG GCGGGCGCGC GATCCGGCAG GGGATCGAGT TCGACGCGGT GGGCCGGCGG
GTGGCCTATC ACTTCCATCG CCGCCATCCG GGCGATCCGA CCGAGCCGGG GCTTGCGGGC
GAGACGGTGC GCGTGCCGGC CGAGGATGTG CTCCACATCG TCGATCCGGT CGAGAGCGGC
CAGCTCCGCG GCGTCTCGCG CTTCGCGCCC GCCATCGTGA AGCTCTTCCT GCTCGATCAG
TACGACGATG CCGAACTCGA CCGGAAGAAG GTCGCGGCCA TGTATGCGAT GTTCATCACC
TCGAACGATC CGGATGCGGC GCCGCTCGAG GGCGAGCTGG GCGATCAGGT GGCGCCGGGG
CAGATCGTGC GTCTCGACCC GGGCGAGGAC ATGAAGGTGG CCGATCCCGC GGACTCGGGC
GCGACCTACG AGCCGTTCCA GTACCGCACG CTCCTGCAGG TCTCGGCCGC GCTCGGGATC
CCCTACGCCC ATCTCTCGCA GGACATGGTG AAGGCGAACT ATTCCAATGC CCGCACCGCG
CTCATGGAAT TCCGCCGCCG GGTCGAGGCC TTCCAGCATT CGGTCCTCGT CTATCAGCTC
TGCCGTCCGG TCTGGGCGCG CTTCACCGAT CTCGCGGTGC TGACCGGAGC GGTGCGGCTG
CCGGGCTATG AGCGCCGGAG GCGGGACTAT CTCGCCTGCG AGTGGCTGCC GCCGAAGTGG
CAATGGGTCG ATCCGCTGAA GGACATCCGC GCCGAGATCG AGGAGATCGG CGCGGGCCTC
AAAAGCCGGT CGCAGGCGAT CGGGGAGCGC GGCTACGACG CCGAGGAGGT CGATCGCCAG
ATCGCCGCCG ACCGCAAGCG CGAGGGGCGG CTCGGGCTCG ACTTCCGCCG CAGCGCGCAG
GGCTCCTCCG CACCTGCGGC GCAGGACGGG GCGCGCGCCG ACGAGGAGGA CGACGAGGAT
GACGACGGCC GCGCGGCGGA CCGCGACGCC GGCAGGAGGG CAGAGCCATG A
|
|---|
| Protein sequence | MAGTFLRRLG AWVGGFDAGL ANRRLRGFRP ARAHVNALLA AAGPDMNARA RYLVRNNGYA
QGALDSWAAN TVGTGVKPSS LIAAPARKAA LQRLWQDWTD EADAEGVTDF YGLQRRIARE
FFLTGECFVR LRARRPGDGL TVPLQLQCLP SEMLPIGRTE VLGGGRAIRQ GIEFDAVGRR
VAYHFHRRHP GDPTEPGLAG ETVRVPAEDV LHIVDPVESG QLRGVSRFAP AIVKLFLLDQ
YDDAELDRKK VAAMYAMFIT SNDPDAAPLE GELGDQVAPG QIVRLDPGED MKVADPADSG
ATYEPFQYRT LLQVSAALGI PYAHLSQDMV KANYSNARTA LMEFRRRVEA FQHSVLVYQL
CRPVWARFTD LAVLTGAVRL PGYERRRRDY LACEWLPPKW QWVDPLKDIR AEIEEIGAGL
KSRSQAIGER GYDAEEVDRQ IAADRKREGR LGLDFRRSAQ GSSAPAAQDG ARADEEDDED
DDGRAADRDA GRRAEP
|
|---|
| |