| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3236 |
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| Symbol | dnaE |
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| ID | 4898139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 297592 |
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| End bp | 301083 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640113834 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001045104 |
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| Protein GI | 126463991 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.040942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACG CTCCCCGATT CATCCATCTG CGCGTCCATA CCGAATATTC GCTGCTCGAG
GGCGCGGTGC CGGTGAAGAA GCTGATCGGC CTCTGCACGG CCGCCGCCAT GCCCGCCGTG
GCGGTGACGG ATACCAATGC CATGTTCGCC GCGCTGGAAT TCTCGGTGCT GGCCAGCGGC
GCCGGGATCC AGCCCATCGT CGGCTGTCAG GTCTCGGTCG CCTACGAGAC GGCGGCGCTG
GGAGAGCGGC CGAAGCCGCC CGCGCCGGTC GTGCTGCTGG CCCAGACCGA GGCGGGCTAC
GGCAACCTCA TGAAGCTCTC CTCCTGCCTC TATCTCGGCA AGGAGGGGGC GCTGCCGCAG
GTGACGCTGT CCGAACTCGA GCGGCATGGA GAGGGGCTGA TCTGCCTGAC CGGCGGGCCG
GACGGACCGG TGGGCCGGCA TCTGCGGGAG GGGCAGCGGG CGAAGGCCGA GGCGCTGCTG
GGCCGCCTCG CCGCGATCTA TCCCGGGCGG CTCTATGTCG AGCTGCAGCG CCATCCGGGC
GAGGGCGGGC GGCTGACCGA GGCCGAGCGT GCGACCGAGC CGGGGCATGT CGAGCTGGCC
TATGCGATGG GCCTGCCGCT CGTGGCCACG AACGACGTCT ATTTTCCGAA GCCCGAGATG
TATGAGGCGC ACGATGCGCT GATCTGCATC GCCGAAGGGG CCTATGTCGA TCAGGTGGCG
CCGCGGCGGC GGCTCACGCC GCAGCATTAT TTCAAGTCCG AGGCCGAGAT GGTCGCGCTG
TTCGCCGACC TGCCCGAGGC GGTGGAGAAC ACCGTCGAGA TCGCGCGCCG CTGCGCCTTC
AAGGCGGCCA AGCGCCCGCC GATCCTGCCG CGCTTCGCCG ACGACGAGGT GGAGGAGCTG
CGGCGGCAGG CCAAGGAGGG GCTGGCCGCG CGCCTCGCCG TGATCCCCCA TGCGGCGCCC
GTCGAGGACT ATGAGGCGCG CCTCGCCTTC GAGCTCGGCA TCATTGAGCA GATGGGCTTT
CCGGGCTATT TTCTGATCGT GGCCGACTTC ATCAAGTGGG GCAAGGCCAA CGGCATCCCG
GTGGGACCGG GACGGGGGTC GGGTGCGGGC TCGCTCGTGG CCTATGCGCT GACGATTACC
GACCTCGATC CGTTGCGTTA CCAGCTTCTC TTCGAGCGGT TTCTCAACCC CGAGCGGGTC
TCGATGCCCG ACTTCGACAT CGACTTCTGC ATGGACCGGC GCGAGGAGGT CATCCGCTAC
GTCCAGGAGA AATACGGCCG CGACAAGGTG GGGCAGATCA TCACCTTCGG CGCGCTCCTC
TCGAAGGCGG CCGTCCGCGA TGTGGGCCGC GTCCTCCAGA TGCCCTACGG GCAGGTGGAC
CGGCTGTCGA AGATGATCCC GGTCGAGGGG GTGAAGCCCG TCTCGATCCA GAAGGCGCTG
GCCGACGAGC CGCGGCTGCG CGAGGCCGCG AAGACCGAGG AGGTGGTGAA GCGGCTTCTG
GACTACGGGA TGCAGGTTGA GGGGCTTCTG CGCAACGCCT CGACCCATGC CGCGGGCGTG
GTGATCGGCG ACCGGCCGCT CGACGAACTG GTGCCGCTCT ATCAGGATCC GCGCTCGGAC
ATGCCCGCCA CCCAGTTCAA CATGAAATGG GTGGAAGCCG CGGGGCTGGT GAAGTTCGAC
TTCCTCGGCC TGAAGACGCT GACGGTGATC CAGAACGCGA TCGATCTGAT CCGCGGCACG
GGGCGGCCCC TGCATATGGC TGCGGACGGG CGGGTGCTCT ACGATCCGCC GCCGGGAGCC
GAGAACGACA TCGGGCATAT TCCGCTCGAG GACAAGGCCA CCTACGAGCT CTATGCGCAG
GCCAAGACCG TGGCGGTGTT CCAGGTCGAA AGCTCGGGCA TGATGGATGC GCTGCGACGC
ATGAAGCCCA CCTGCATCGA GGATATCGTG GCGCTGGTGG CGCTTTACCG GCCGGGGCCG
ATGGAGAACA TCCCGGTCTA TTGCGAGGTG AAGCACGGGC TGCGCGATCT CGAGAGCCTG
CATCCGACCA TCGACCCGAT CCTGAAGGAG ACGCAGGGCA TCATCGTCTA TCAGGAACAG
GTGATGCAGA TCGCGCAGGT CATGGGGGGC TATACGCTCG GCGGCGCGGA CCTTCTCCGC
CGCGCCATGG GCAAGAAGAT CGCCGAGGAG ATGGCGAAGG AGCGCCCGAA GTTCATCGAA
GGCGCAAAGA AGACCCACGG GATCGACGCG AAGAAAGCCG GCGAAGTCTT CGACCTGCTT
GAGAAATTCG CGAACTACGG CTTCAACAAG TCTCACGCCG CGGCCTATGC GGTCGTGAGC
TACCAGACCG CCTGGCTGAA GGCGAACCAT CCGGTCGAGT TCATGGCCGC GGTGATGAAC
TGCGATATCC ACCTGACCGA CAAGCTCGCC GTCTACAAGC GCGAGGTGGA CAAGCTCGGC
ATCCGCACGG TGGCGCCCTG CGTGAATGCC TCGCTCGCCA CCTTCACGGT GCGCGACGGC
GCGGTGGTCT ATGCCTTGGG CGCGCTGAAG AACGTGGGTG TCGAGGCGAT GCGGCTCATC
GTCGAGGCCC GCGGCGACCG GCCCTTCGCC ACGCTCTTCG ACATGGCGCG GCGGGTGGAG
CTGAAGCGGA TCGGCAAGCG TCCTCTCGAG ATGCTGGCGC GCGCCGGGGC TTTCGACGCG
CTCGACCGCA ACCGTGCCCG GGTGTTCGAG GCGCTGGATG CGCTGGTGGC CTATTCCGCC
GCCATTCACG AAGCGCGAAA TTCGAGCCAG GTGTCGCTGT TCGGCGAAGC AGGGGCGGAC
ATCCCCGAGC CGCGGCTGCC GTCGCGCGAC GACTGGCTGC CGGTCGAGCG GCTGGCGCAG
GAGCATCAGG CGATCGGCTT CTATCTCTCG GGCCATCCGC TCGACGATTA CATGGGCGCG
CTGAAGCGGC GCAACGTCAC CACGCTTGCC GCGCTGACCG ATCTGGCGCA GCGGGGGCCC
ATGGTGGCCA AGCTCGCCGG TGCCGTCTCG TCGCGGCAGG AGAAGAAGTC GGCCAAGGGC
AACCGCTTCG CCTTCGTCCA GCTTTCGGAT CCGACGGGGC TCTACGAATG CACCGTCTTT
TCGGACGTGC TTGAGCAGGC GCGCGACCTG CTGGAGCCGG GCGGCCATGT GGTGCTGACC
GTCGAGGCCA CGCTCGAGGG CGACAGTCTG AAGCTCCTCG CGCGCGGGGT CTCGCCCATC
GATGCGGTGG CGGCCGATGC GGGCGCGATG AGCCTGCGCG TCCATCTCGA CCGTGCCGAG
GCCGCGGCCT CGGTGGCGGC GCTGCTGGCC CGTGCGCAGG GCCGCGCCCG GGCGCCGGTG
CGGATCTGCG TCCGCGATCC GTCGGGCGGG CAGGAGATCG ACATCGAGCT CGGTCAGGAT
TTCGCCGTCT CGCCGCAGAT CCGCAGCGCG CTCCGCGCCG TGCCGGGGGT GGAGATGGTC
GAGGAGATCT AG
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| Protein sequence | MSNAPRFIHL RVHTEYSLLE GAVPVKKLIG LCTAAAMPAV AVTDTNAMFA ALEFSVLASG
AGIQPIVGCQ VSVAYETAAL GERPKPPAPV VLLAQTEAGY GNLMKLSSCL YLGKEGALPQ
VTLSELERHG EGLICLTGGP DGPVGRHLRE GQRAKAEALL GRLAAIYPGR LYVELQRHPG
EGGRLTEAER ATEPGHVELA YAMGLPLVAT NDVYFPKPEM YEAHDALICI AEGAYVDQVA
PRRRLTPQHY FKSEAEMVAL FADLPEAVEN TVEIARRCAF KAAKRPPILP RFADDEVEEL
RRQAKEGLAA RLAVIPHAAP VEDYEARLAF ELGIIEQMGF PGYFLIVADF IKWGKANGIP
VGPGRGSGAG SLVAYALTIT DLDPLRYQLL FERFLNPERV SMPDFDIDFC MDRREEVIRY
VQEKYGRDKV GQIITFGALL SKAAVRDVGR VLQMPYGQVD RLSKMIPVEG VKPVSIQKAL
ADEPRLREAA KTEEVVKRLL DYGMQVEGLL RNASTHAAGV VIGDRPLDEL VPLYQDPRSD
MPATQFNMKW VEAAGLVKFD FLGLKTLTVI QNAIDLIRGT GRPLHMAADG RVLYDPPPGA
ENDIGHIPLE DKATYELYAQ AKTVAVFQVE SSGMMDALRR MKPTCIEDIV ALVALYRPGP
MENIPVYCEV KHGLRDLESL HPTIDPILKE TQGIIVYQEQ VMQIAQVMGG YTLGGADLLR
RAMGKKIAEE MAKERPKFIE GAKKTHGIDA KKAGEVFDLL EKFANYGFNK SHAAAYAVVS
YQTAWLKANH PVEFMAAVMN CDIHLTDKLA VYKREVDKLG IRTVAPCVNA SLATFTVRDG
AVVYALGALK NVGVEAMRLI VEARGDRPFA TLFDMARRVE LKRIGKRPLE MLARAGAFDA
LDRNRARVFE ALDALVAYSA AIHEARNSSQ VSLFGEAGAD IPEPRLPSRD DWLPVERLAQ
EHQAIGFYLS GHPLDDYMGA LKRRNVTTLA ALTDLAQRGP MVAKLAGAVS SRQEKKSAKG
NRFAFVQLSD PTGLYECTVF SDVLEQARDL LEPGGHVVLT VEATLEGDSL KLLARGVSPI
DAVAADAGAM SLRVHLDRAE AAASVAALLA RAQGRARAPV RICVRDPSGG QEIDIELGQD
FAVSPQIRSA LRAVPGVEMV EEI
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