Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3166 |
Symbol | |
ID | 4899165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 190919 |
End bp | 191797 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640113768 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001045038 |
Protein GI | 126463925 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0506043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGA GCATCGACCC CCGCCCCGCC ACGCCGTCGC GCCTGACCCG CGCCCGCAGG CTTCTCGCGA CCGCGCCCTT CACCGCACGG CTGGGAATGG TCCTCGTCGC GATCTACGCC TTCGTCGCGA TCTTCGCACC CTGGATCGCG CCCTATGGCG AGGTCGAGGT GGTCTCGCGC ATCCCCTTCG ACGGCTGGAG CGCCCAGCAT CTGCTGGGCA CCGACCAGCT CGGGCGGGAT TTCCTGTCGC GGCTGATCTT CGGCGCGCGG AACTCGATCT CCATCGCGCT CGTGACCACG ATGATCTCCT TCGGGATCGG CTGCCTCCTC GGCGTCTTCT CGGCGCTGAT CGGCGGCTTC GTCGATCAGG CGATCTCGCG CTTCGTGGAT GCGCTGATGT CGGTGCCGGA TCTGATCTTC ATCCTGATGA TCCTGTCGAT CTTCGGCAAT TCGATCCCGA ACCTCATCCT CATCATCGCC GTGCTGACCT CGACCCGCTT CTTCCGCATC TCGCGCGCCG CGGCGCTGAA CGTGGCCAGC CTCGATTTCG TCGAGGCCGC CCGGGTGCGC GGCGAGAGCC TGCTCTGGAT CTCGGTCCAC GAGGTGTTCC CGAACGTGCT GCCGCTGATC CTGTCCGAGC TCGGGATGCG CTTCTGCTTC ATCTTCCTCT CCATCGCGGC GCTGTCCTTC CTCGGCGTGG GCATCCAGCC GCCGCTGGCG GAATGGGGCT CGATGGTGCG GGACAATGCG GCCCTCATCA ACATGGGCGA TATCACGCCC CTGATCCCGG CCGCCTCCAT CGCGCTGCTC GCCATCGCGG TCAATTTCGT GGTCGACTGG CTGCTGAACC GGGCCAGCGG CCTGAACGAG GAGGGCTGA
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Protein sequence | MDQSIDPRPA TPSRLTRARR LLATAPFTAR LGMVLVAIYA FVAIFAPWIA PYGEVEVVSR IPFDGWSAQH LLGTDQLGRD FLSRLIFGAR NSISIALVTT MISFGIGCLL GVFSALIGGF VDQAISRFVD ALMSVPDLIF ILMILSIFGN SIPNLILIIA VLTSTRFFRI SRAAALNVAS LDFVEAARVR GESLLWISVH EVFPNVLPLI LSELGMRFCF IFLSIAALSF LGVGIQPPLA EWGSMVRDNA ALINMGDITP LIPAASIALL AIAVNFVVDW LLNRASGLNE EG
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