| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3016 |
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| Symbol | |
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| ID | 4898791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 24181 |
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| End bp | 25602 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640113618 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001044888 |
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| Protein GI | 126463775 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACC CTCAAGTGGC CCTGCTGATG CTGGGCATCT TCATCTCGCT CGTCTTCCTC
GGCTTCCCCA TCGCCTTCAC CCTCATGGCC CTCGGCATCG GCTTCGGCTA TTACGCCTAT
TTCGATGCGA GCCGGATGTG GCGCGCCTTC AACCGGCTGG GCGAGGAGGC CGACGGCTGG
ACCTCGGCCT CGACCTGGGT CGAGGGGTTC TTCAACAACC GGATCTTCGA CCTCTTCATC
AACCAGACAT ACACGGTGAT GTCGAACGAG GTGCTGACCG CGATCCCGCT CTTTCTCTTC
ATGGGCTACA TCGTCGAGCG GGCGAACATC GTGGACAGGC TCTTCACCAC GCTCAACATC
GCCTCGAAGA ACATCCCCGG CTCGATGGGG GTGGCAGCGC TCGTGACCTG CGCGCTCTTC
GCCACGGCCA CCGGCATCGT GGGCGCGGTG GTGACGCTGA TGGGGCTTCT CGCGCTGCCC
GCGATGCTGA AATCCCGCTA CGACCATGCC TTCGCCTCGG GGATCATCTG CGCGGGCGGC
ACGCTCGGCA TCCTGATCCC GCCCTCGATC ATGCTGATCG TCTATGCCGC CTCCTCGGGC
GTCTCGATCG TGCGGCTCTA TGCGGCGGCG CTCCTGCCGG GGCTCACGCT CGTGGGCCTC
TACCTCGTCT ACATCATCGG CCGGGCGATC CTGCAGCCGC ATGTGGCGCC ACGCCCGGCG
CCGGGCGAGG TGCCGGACGT GCCGGGGGGC AAGCTCTTCC TGATGCTGCT CACCTCGTTC
TTCCCGCTGG CGGTGCTGAT CCTCGCGGTG CTGGGCTCGA TCCTGTTCGG GCTGGCCACG
CCCACCGAGG CGGCCTCGAT CGGGGCGCTC GGGGGCATGG TGCTGGCCGT CCTCTACCGC
GCGATGACCT TCGAGAGGCT GCGCGAGAGC GTCTATCTCA CCGTGCGCAC GACGGCGATG
GTCTGCTGGC TCTTCGTCGG CTCCTACACC TTCTCAGCGG TCTTCTCCTA CCTCGGCGGC
GAGCAGGTGA TCGCCGACTT CGTGGGGAGC CTCGATCTCA CACCGTTCCA GTTCCTCATC
CTTGCGCAGA TCATCATCTT CCTGCTCGGC TGGCCGCTCG AATGGTCCGA GATCATCATC
ATCTTCGTGC CGATCTTCCT GCCGCTCTTG CGGATCTTCG ACATCGACCC GCTGTTCTTC
GGGGTGCTCG TCGCGCTGAA CCTGCAGACC TCGTTCCTGA CACCGCCGAT GGCCATGTCG
GCCTATTACC TGAAGGGGAT CGCGCCGCCG CAGGTGCGGC TCACGCAGAT CTTCGCGGGC
TCCTTGCCCT ATGTGGGGAT GGTCTTCGTC TGCATGGCGC TGATGTATCT CTTCCCGCAG
ATCGTCTTCG CACTTCCGGA GTTCGTCTAT GGGGCGCGCT GA
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| Protein sequence | MTDPQVALLM LGIFISLVFL GFPIAFTLMA LGIGFGYYAY FDASRMWRAF NRLGEEADGW
TSASTWVEGF FNNRIFDLFI NQTYTVMSNE VLTAIPLFLF MGYIVERANI VDRLFTTLNI
ASKNIPGSMG VAALVTCALF ATATGIVGAV VTLMGLLALP AMLKSRYDHA FASGIICAGG
TLGILIPPSI MLIVYAASSG VSIVRLYAAA LLPGLTLVGL YLVYIIGRAI LQPHVAPRPA
PGEVPDVPGG KLFLMLLTSF FPLAVLILAV LGSILFGLAT PTEAASIGAL GGMVLAVLYR
AMTFERLRES VYLTVRTTAM VCWLFVGSYT FSAVFSYLGG EQVIADFVGS LDLTPFQFLI
LAQIIIFLLG WPLEWSEIII IFVPIFLPLL RIFDIDPLFF GVLVALNLQT SFLTPPMAMS
AYYLKGIAPP QVRLTQIFAG SLPYVGMVFV CMALMYLFPQ IVFALPEFVY GAR
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