| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2954 |
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| Symbol | |
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| ID | 4895786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 3109129 |
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| End bp | 3111312 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640113557 |
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| Product | transketolase, central region |
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| Protein accession | YP_001044828 |
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| Protein GI | 126463714 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.998903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCT CGCTCATCGT CCATGAGAAT TTCCTCTCCC GCGTGAAGGC CCGCGACCTG
CCGCAGGGCG CCCCGCCCAC CCCCGGCCTC GCCCCGCACG AGATGGTGGC ACTCTTCCGC
AGCCAGTGCC TGTCGCGCGC GCTCGACCGG ACCAGCCGTT CCATGCAGAA GGCGGGGCAG
GGCTTCTACA CGATCGGCTC CTCGGGGCAC GAGGGGATGG TCGCCGTGGC CCATGCGCTG
CGCCCCAGCG ACATGGCCTT CCTCCATTAC CGCGACGCGG CCTTCCAGAT CGCGCGCGCG
GCGCAGCTCG GCCAGAGCAT CGCCTGGGAC ATGCTTCTGT CCTTCGCCTC CTCCGCCGAG
GATCCGATCT CCGGCGGGCG GCACAAGGTG CTGGGCTCGA AGGCGCTGGC CATCCCGCCC
CAGACCTCGA CCATCGCGAG CCACCTGCCG AAGGCGGTGG GGGCGGCCTA TTCGCTGGGC
CTCGCGCGGC GCCGCCCGCC CGAGCACCGC GCCCTGTCCG AGGATGCGCT GGTGATGGCC
AGTTTCGGCG ACGCCTCGGC CAACCATTCC ACCGCGCAGG GCGCCTTCAA CACCGCGGGC
TGGACCGCCT TCCAGTCGGT GCCGCTGCCG CTCCTCTTCG TCTGCGAGGA CAATGGCATC
GGCATCTCGA CCAGAACCCC GCGCGGCTGG ATCGAGGCAA GCTTCCGCGC CCGCCCCGGC
CTGCGCTACT TCCGCGCCAA CGGGCTCGAC ATGTCAGAGA CTTACGCCGT GGCGGCCGAA
GCCGCAGCCT ATGTCCGCAA CCGCCGCAGG CCCGCCTTCC TGCATCTGGG AACCGTCCGC
CTCTATGGCC ATGCCGGGGC GGACCTGCCC ACCACCTACA TGAGCCGCGA GGAGGTCGAG
GCCGAGGAGG CCAACGATCC GCTCCTGCAC AGCGTCCGGC TGATGGAGGC CGCAGGCGCG
CTCGACCCCG ACGAGGCTCT CGCGATCTAC CTCGAGACGC AGGAGCGCGT GGACCGGGTC
GCGGCCGAGG CGGTCACCCG GCCGAGACTG AAGACGGCCT CCGACGTGAT GGCGAGCCTG
ATCCCCCCGG CCCGGCCCTG CGCCCCCACC AACGGCCCCT CGGCCGATTC CCGCGCCGCG
GCCTTCGGCT CCGACCTCAA GGCGATGGCC GAGCCGCAGC CGATGAGCCG CCTCATCAAC
TGGGCGCTCA CCGACCTCAT GCTCGCCCAC CCCGAGATCG TGCTGATGGG CGAGGATGTG
GGCCGCAAGG GCGGGGTCTA TGGCGTGACC CAGAAGCTCC AGACCCGCTT CGGCCCCGAC
CGGGTGATCG ACACGCTCCT CGACGAACAG TCGATCCTCG GCCTCGGGAT CGGCATGGCC
CACAACGGCT TCCTGCCCAT CCCCGAGATC CAGTTCCTCG CCTATCTCCA CAATGCCGAG
GACCAGATCC GCGGCGAGGC GGCCACCCTG CCCTTCTTCT CGAACGGACA ATATACCAAC
CCGATGGTGC TCCGGATCGC GGGGCTCGGC TATCAGAAGG GCTTCGGCGG CCATTTCCAC
AACGACAATT CCATCGCCGT CCTGCGCGAT ATCCCCGGGC TGATCCTCGC CTGTCCCTCG
GACGGGGCCG AGGCCGCGAT GATGCTGCGC GAATGCGTGC GGCTCGCGCG CGAAGAGCAG
CGGCTGGTGG TCTTCCTCGA ACCGATCGCG CTCTATCCGA TGCGCGACCT TGCGGAAGAG
AAGGACGGGG GCTGGATGCG GACCTATCCC GACCCGTCCG AGCGGCTCCG ATTCGGCGAG
ATTGGCTGCC ACGGCGAAGG CCGGGATCTG GCCATCGTGA CCTTCGGCAA CGGCATCTAC
CTGTCGCAAC AGGCGAATTT CACGCTTCGT GAAAATGGCG TGGCCGCGCG GATCCTCGAT
CTGCGCTGGC TCGCGCCCCT GCCGCTCGAG GCGATGCTCG AGGCCACGCG CGACTGCCGC
GCCGTCCTCG TGGTCGACGA ATGCCGCCGC TCGGCGGGCG GCCCGGCCGA GGCGCTGATG
ACGGCGCTGG CCGAGGCGGG CCGCACCCGC ATCGCCCGCA TCACCGCCGA GGACAGTTTC
ATCGCCACCG GCCCCGCCTA TGCCGCCACC CTGCCCTCGG CCGCCGGCAT CGCCGAGGCG
GCGCTCACGC TGGTGCGGGC ATGA
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| Protein sequence | MPRSLIVHEN FLSRVKARDL PQGAPPTPGL APHEMVALFR SQCLSRALDR TSRSMQKAGQ
GFYTIGSSGH EGMVAVAHAL RPSDMAFLHY RDAAFQIARA AQLGQSIAWD MLLSFASSAE
DPISGGRHKV LGSKALAIPP QTSTIASHLP KAVGAAYSLG LARRRPPEHR ALSEDALVMA
SFGDASANHS TAQGAFNTAG WTAFQSVPLP LLFVCEDNGI GISTRTPRGW IEASFRARPG
LRYFRANGLD MSETYAVAAE AAAYVRNRRR PAFLHLGTVR LYGHAGADLP TTYMSREEVE
AEEANDPLLH SVRLMEAAGA LDPDEALAIY LETQERVDRV AAEAVTRPRL KTASDVMASL
IPPARPCAPT NGPSADSRAA AFGSDLKAMA EPQPMSRLIN WALTDLMLAH PEIVLMGEDV
GRKGGVYGVT QKLQTRFGPD RVIDTLLDEQ SILGLGIGMA HNGFLPIPEI QFLAYLHNAE
DQIRGEAATL PFFSNGQYTN PMVLRIAGLG YQKGFGGHFH NDNSIAVLRD IPGLILACPS
DGAEAAMMLR ECVRLAREEQ RLVVFLEPIA LYPMRDLAEE KDGGWMRTYP DPSERLRFGE
IGCHGEGRDL AIVTFGNGIY LSQQANFTLR ENGVAARILD LRWLAPLPLE AMLEATRDCR
AVLVVDECRR SAGGPAEALM TALAEAGRTR IARITAEDSF IATGPAYAAT LPSAAGIAEA
ALTLVRA
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