Gene Rsph17029_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2895 
SymbolaroE 
ID4897848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3052998 
End bp3053837 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID640113498 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001044769 
Protein GI126463655 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0777149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAC TCACGCGGAT CCCGCTGGCG GGGGTGATCG GATCGCCCAT CGCCCACAGC 
CGGTCGCCGG CGCTGCATGG CTACTGGCTG AAGCGCTATG GGCTGAAGGG CCACTATATT
CCGATGGATG TGGCGCAGGC CGACCTGCGC GACGTGCTGG CCGCGATGCC GCGGATGGGG
TTCGTGGGCT GCAACGTGAC GATCCCGCAC AAGGAATCGG TGATCGGTCT GGCCGACATC
GTGACCGACC GCGCGGCGCT GATCGGTGCG GCTAACACGC TGATCTTCCG CAAGGACGGC
AAGATCTACG CCGACAACAC CGACGGCACC GGCTTCACCG CCAACCTGCG TCAGAATGCG
CCCGCCTGGC AGCCCCAGTC GGGGCCGGCG GTGGTCTGGG GCGCGGGCGG GGCTGCGCGG
GCCGTCATCG CCGCGCTGAT CGAGGTGGGC GTGCCCGAGA TCCGGCTGGC GAACCGCAGC
CGGGCGCGGG CCGACGCGCT CCGCTCGGAC TTCGGCGCCA AGGTGCATGT GCATGACTGG
GTGCAGGCCG GCAACATCCT CGAAGATGCG ATGACGGTCG TGAACACCAC CTCGCTCGGC
ATGGTGGGCA AGCCCGAGTT TCGTGTGCCG CTCGATGCGC TGAACCCGAA GGCCGTGGTG
ACGGATCTCG TCTATGCGCC GCTTCGGACG CGGCTTCTGG TCGAGGCCGA GGCGGCGGGC
TGCCGGACCG TGGACGGGCT CGGGATGCTC CTGCACCAGG CCGCGCCCGG TTTCGAGCGC
TGGTTCGGCG TCCGGCCCGA GGTGGACGAG GAGACCCGGG CCGCCGTGCT GGCCGCATGA
 
Protein sequence
MTELTRIPLA GVIGSPIAHS RSPALHGYWL KRYGLKGHYI PMDVAQADLR DVLAAMPRMG 
FVGCNVTIPH KESVIGLADI VTDRAALIGA ANTLIFRKDG KIYADNTDGT GFTANLRQNA
PAWQPQSGPA VVWGAGGAAR AVIAALIEVG VPEIRLANRS RARADALRSD FGAKVHVHDW
VQAGNILEDA MTVVNTTSLG MVGKPEFRVP LDALNPKAVV TDLVYAPLRT RLLVEAEAAG
CRTVDGLGML LHQAAPGFER WFGVRPEVDE ETRAAVLAA