Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2895 |
Symbol | aroE |
ID | 4897848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 3052998 |
End bp | 3053837 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640113498 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001044769 |
Protein GI | 126463655 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0777149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAC TCACGCGGAT CCCGCTGGCG GGGGTGATCG GATCGCCCAT CGCCCACAGC CGGTCGCCGG CGCTGCATGG CTACTGGCTG AAGCGCTATG GGCTGAAGGG CCACTATATT CCGATGGATG TGGCGCAGGC CGACCTGCGC GACGTGCTGG CCGCGATGCC GCGGATGGGG TTCGTGGGCT GCAACGTGAC GATCCCGCAC AAGGAATCGG TGATCGGTCT GGCCGACATC GTGACCGACC GCGCGGCGCT GATCGGTGCG GCTAACACGC TGATCTTCCG CAAGGACGGC AAGATCTACG CCGACAACAC CGACGGCACC GGCTTCACCG CCAACCTGCG TCAGAATGCG CCCGCCTGGC AGCCCCAGTC GGGGCCGGCG GTGGTCTGGG GCGCGGGCGG GGCTGCGCGG GCCGTCATCG CCGCGCTGAT CGAGGTGGGC GTGCCCGAGA TCCGGCTGGC GAACCGCAGC CGGGCGCGGG CCGACGCGCT CCGCTCGGAC TTCGGCGCCA AGGTGCATGT GCATGACTGG GTGCAGGCCG GCAACATCCT CGAAGATGCG ATGACGGTCG TGAACACCAC CTCGCTCGGC ATGGTGGGCA AGCCCGAGTT TCGTGTGCCG CTCGATGCGC TGAACCCGAA GGCCGTGGTG ACGGATCTCG TCTATGCGCC GCTTCGGACG CGGCTTCTGG TCGAGGCCGA GGCGGCGGGC TGCCGGACCG TGGACGGGCT CGGGATGCTC CTGCACCAGG CCGCGCCCGG TTTCGAGCGC TGGTTCGGCG TCCGGCCCGA GGTGGACGAG GAGACCCGGG CCGCCGTGCT GGCCGCATGA
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Protein sequence | MTELTRIPLA GVIGSPIAHS RSPALHGYWL KRYGLKGHYI PMDVAQADLR DVLAAMPRMG FVGCNVTIPH KESVIGLADI VTDRAALIGA ANTLIFRKDG KIYADNTDGT GFTANLRQNA PAWQPQSGPA VVWGAGGAAR AVIAALIEVG VPEIRLANRS RARADALRSD FGAKVHVHDW VQAGNILEDA MTVVNTTSLG MVGKPEFRVP LDALNPKAVV TDLVYAPLRT RLLVEAEAAG CRTVDGLGML LHQAAPGFER WFGVRPEVDE ETRAAVLAA
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