| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2835 |
|---|
| Symbol | dnaK |
|---|
| ID | 4897352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2986930 |
|---|
| End bp | 2988840 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640113438 |
|---|
| Product | molecular chaperone DnaK |
|---|
| Protein accession | YP_001044709 |
|---|
| Protein GI | 126463595 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.195786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAG TCATCGGGAT CGACCTCGGG ACGACCAACT CCTGCGTCGC CATCATGGAC
GGCGCGCAAC CCCGCGTGAT CGAGAACTCC GAAGGGGCGC GGACGACGCC CTCCATCGTC
GGTTTCACCG ACAGCGAACG CCTCGTGGGC CAGCCGGCCA AGCGCCAGGC GGTCACGAAC
CCCTCGAACA CCGTCTTCGC CGTCAAGCGG TTGATCGGCC GCCGCGTGGG CGACGCCGAG
GTGGAAAAGG ACAAGAAGCT CGTTCCCTAT TCCATCGTGA ACGGCGGCAA CGGCGACGCC
TGGGTCGAGG TGCGTGGCGA GAAATATTCG CCCAGCCAGA TCTCCGCCTT CATCCTGCAG
AAGATGAAGG AAACCGCCGA GGCCTATCTC GGCGAAACGG TGACGCAGGC CGTCATCACG
GTGCCTGCCT ACTTCAACGA CGCCCAGCGT CAGGCGACCA AGGACGCCGG CAAGATCGCG
GGCCTCGAGG TGCTGCGCAT CATCAACGAG CCGACGGCCG CGGCGCTCGC CTACGGTCTC
GACAAGAAGG ACACCAAGAC GATCGCGGTC TATGACCTCG GCGGCGGCAC CTTCGACATC
ACTATCCTCG AGATCGACGA CGGCCTGTTC GAAGTGAAAT CGACCAACGG GGACACGTTC
CTCGGCGGCG AAGACTTCGA CATGCGGATC GTCAACTACC TCGCGGACGA GTTCAAGAAA
GAGCACGGGG TCGACCTCAC GCTCGACAAG ATGGCGCTGC AGCGGCTGAA GGAAGCCGCC
GAGAAGGCCA AGATCGAGCT CAGCTCCAGC CAGCAGACCG AGATCAACCA GCCCTTCATC
AGCATGGACC GGAACACCGG GCAGCCGCTG CACATGGTGA TGAAGCTGAC CCGCGCGAAG
CTGGAAAGCC TCGTGGGCGA TCTCATCAAG AAGTCGCTGA AGCCCTGTGA AGCCGCGCTG
AAGGATGCGG GCGTCTCGAA GTCGGACATC GACGAGGTCG TTCTCGTCGG CGGCATGACC
CGGATGCCGC GGGTGGTCGA AGAGGTCACC AAGTTCTTCG GCAAGGAACC GCACAAGGGC
GTGAACCCCG ATGAGGTCGT GGCGCTCGGC GCGGCGATCC AGGCGGGCGT GCTGCAGGGC
GACGTGAAGG ACGTCGTGCT GCTCGACGTG ACCCCGCTCT CGCTCGGCAT CGAGACGCTG
GGCGGCGTGT TCACCCGCCT GATCGACCGC AACACCACGA TCCCGACCAA GAAGAGCCAG
GTCTTCTCGA CCGCCGAGGA CAACCAGAAC GCGGTGACGA TCCGCGTCTT CCAGGGCGAA
CGCGAGATGG CGGCCGACAA CAAGCTGCTC GGCCAGTTCA ACCTCGAAGA CATCCCGCCG
GCCCCGCGCG GCATGCCGCA GATCGAGGTG ACCTTCGACA TCGACGCCAA CGGCATCGTG
TCGGTCAGCG CCAAGGACAA GGGCACCGGC AAGTCGCAGA ACATCACGAT CCAAGCCTCG
GGCGGTCTCT CCGACGAGGA TATCGAGAAG ATGGTGCGCG ACGCCGAGGC CAATGCCGAG
GCCGACAAGA AGCGCCGCGA GTTGGTCGAG ACCAAGAACC AGGGCGAAAG CCTGCTGCAC
TCGACCCGCA AGTCGATCGA GGAGCACGGC GACAAGGTGG ATCCGTCCAC CGTCGAGGCG
ATCGAGCTGG CCATGGGCGC GCTCGAAGAG GCCCTCAAGT CCGAGGACGC CGGCAAGATC
AAGGGCGGCA TCCAGAACCT GACCGAGGCC GCGATGCGTC TCGGCGAGGC GATCTACAAG
GCCAGCCAGG CCGAGGGGGG CGCCACGCCG GACGAGGAGG GGCCCCGGTC GGTGGATGAC
GACATCGTCG ACGCCGACTT CGAGGATCTC GGCGAGAACA AGCGGAAGTA A
|
|---|
| Protein sequence | MAKVIGIDLG TTNSCVAIMD GAQPRVIENS EGARTTPSIV GFTDSERLVG QPAKRQAVTN
PSNTVFAVKR LIGRRVGDAE VEKDKKLVPY SIVNGGNGDA WVEVRGEKYS PSQISAFILQ
KMKETAEAYL GETVTQAVIT VPAYFNDAQR QATKDAGKIA GLEVLRIINE PTAAALAYGL
DKKDTKTIAV YDLGGGTFDI TILEIDDGLF EVKSTNGDTF LGGEDFDMRI VNYLADEFKK
EHGVDLTLDK MALQRLKEAA EKAKIELSSS QQTEINQPFI SMDRNTGQPL HMVMKLTRAK
LESLVGDLIK KSLKPCEAAL KDAGVSKSDI DEVVLVGGMT RMPRVVEEVT KFFGKEPHKG
VNPDEVVALG AAIQAGVLQG DVKDVVLLDV TPLSLGIETL GGVFTRLIDR NTTIPTKKSQ
VFSTAEDNQN AVTIRVFQGE REMAADNKLL GQFNLEDIPP APRGMPQIEV TFDIDANGIV
SVSAKDKGTG KSQNITIQAS GGLSDEDIEK MVRDAEANAE ADKKRRELVE TKNQGESLLH
STRKSIEEHG DKVDPSTVEA IELAMGALEE ALKSEDAGKI KGGIQNLTEA AMRLGEAIYK
ASQAEGGATP DEEGPRSVDD DIVDADFEDL GENKRK
|
|---|
| |