| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2578 |
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| Symbol | |
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| ID | 4897125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2715952 |
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| End bp | 2716809 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640113177 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001044452 |
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| Protein GI | 126463338 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.319892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.963036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC ATCCCAAACC GCCGTTCCCC GATCAGGAAC AGCCGATGCC CGGCAAGACC
TCCCGCCTCG ATCCGCAACC CGATCACGGG GAGAAGAGCT ATCGCGGCTC GGGTCGCCTG
CAGGACATGA AGGCGGTCAT CACCGGCGCG GACAGCGGCA TCGGCCGGGC CGTGGCGCTG
GCCTTCGCGC GCGAGGGGGC GGACGTGCTG ATCTCCTACC TGTCCGAGGA CGAGGATGCG
GCCGAGACCG AGCGGCTGGT GACGGAGGCC GGGCGCAAGG CGGTTCTGGT GCGCGGCGAC
CTTCAGGACG CGGCCCACTG CCGCGCCGTG ATCGACCGGG CCGTCGAGGA GTTCGGCCGG
ATCGACCTCC TCGTGAACAA TGCCGCCCAT CAGGCGAGCT TCTCCGATCT GGGAGACATC
CCGGACGAGG AATGGGAGCT GACCTTCCGC GTGAACATCC ATGCGATGTT CTATCTGTCG
AAGGCAGCGG TGCCGCACAT GGGCCCGAAC AGCGCGATCA TCAACACGGC CTCGGTTAAT
GCCGATTCGC CGAGCCCGCA TCTTCTGGCC TATGCCACCA CCAAGGGCGC GATCCAGAAC
TTCACCGGCG GCCTCGCGCA GATGCTGGCC GAGAAGGAGA TCCGGGTGAA TTGCGTTGCG
CCGGGCCCGA TCTGGACGCC GCTCATCCCC TCGACCATGC CTGCGGAGAA GGTGAAGAAC
TTCGGCATGC AGGTACCCAT GCAGCGCCCG GGGCAGCCCG CGGAACTGGC CACGGCCTAT
GTGATGCTGG CCGATCCGCT TTCGAGCTAC ACGTCGGGGG CGACCATCGC GGTGACGGGC
GGCAAGCCCA TCATCTGA
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| Protein sequence | MTHHPKPPFP DQEQPMPGKT SRLDPQPDHG EKSYRGSGRL QDMKAVITGA DSGIGRAVAL
AFAREGADVL ISYLSEDEDA AETERLVTEA GRKAVLVRGD LQDAAHCRAV IDRAVEEFGR
IDLLVNNAAH QASFSDLGDI PDEEWELTFR VNIHAMFYLS KAAVPHMGPN SAIINTASVN
ADSPSPHLLA YATTKGAIQN FTGGLAQMLA EKEIRVNCVA PGPIWTPLIP STMPAEKVKN
FGMQVPMQRP GQPAELATAY VMLADPLSSY TSGATIAVTG GKPII
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