Gene Rsph17029_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2418 
Symbol 
ID4897930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2548671 
End bp2549807 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content69% 
IMG OID640113016 
Productpolysaccharide export protein 
Protein accessionYP_001044292 
Protein GI126463178 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.160125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTTA CGACCGTCAG GGGCGCGAGG ACGCTCATTC TTCTCGTGCT CCTATCCACG 
ACGGTCGCCG CTTGCGGGCT GCCGCGCTCG GGGCCGCACA AGCGCGAGAT CTTCGCGGGC
TCCGTCGAGC GGCAGGGCGA TGCCTTCATC GTTCCGGTCA ACCGATTCGT GAGCCGCGTC
ACCGCCGTCA CGCCCGCCTT CGGCTTCAGC TCGAACTTCC GCACGGCCGA CCTCGTGGGC
TCGGACGTGA TCGCGGCGGG CGACACGGTG GGGATCACCG TCTTCGAGAA CGTGCGCGAC
GATCCGCTGC TCGGCAACAG CGGCCAGCGG GTCTCGTCGC TCGATCAGGT GCAGGTGGAC
GGTCAGGGCT ACATCTATGT GCCCTATGCC GGCCGGATCC GCGCCGCGGG CCAGACGCCC
GACGGCCTCC GGCAGGCGAT CACCCGCAAG CTCGACACCC AGACCCCCGA TCCGCAGGTC
TCGGTGCAGC GGCTGGCGGG CGACGGCTCG TCCGTCACCG TCTCGGGCGC CGTGGGCTCG
CAGGGCGTGT TCCCGATCGA GCGGCCGACG CGGACGCTGT CCTCGATGCT GGCCCGGGCG
GGAGGCACCA CCGTGCCCGT CACCACGGCC ATCGTGCGCG TGACCCGCAA GGGCAGCACC
AGCCAGATCT GGCTGCAGGA TCTCTACGAC AATCCCACGC TCGACATCGC CCTGCGTCCG
GGCGACGTGA TCGTGGTGGA AGAGGACGAC CGCTCGTTCG TGGCGCTCGG CGCGACGGGG
CGCCAGACGC GCATCCAGTT CGAGACGCAG AACGTCTCGG CCGTCGAGGC GCTGGCGCAG
GTGGGCGGCC TGAACACCAA CCTCGCCGAT CCGAAGGGCG TGTTCGTCCT GCGCGACGAG
CCCGCCGAGA TCGCCAATTC GGTGCTCGGG CGGACCGATC TCGTGGGCGA TCAGCGGATG
GTCTATGTGC TCGATCTCAC GCAGCCCACC GGTCTGTTCG AGGCGCGCGA CTTCATGATC
CGCGACGGAG ACACGGTCTA TGTGACCGAG GCGCCGTTCG TCCAATGGCA GAAAACCCTC
AGCGCGATCA CGGGCGCCAC GGCCGCCGCC AATCAGGCGG AGGCGGTCGG CAACTGA
 
Protein sequence
MRLTTVRGAR TLILLVLLST TVAACGLPRS GPHKREIFAG SVERQGDAFI VPVNRFVSRV 
TAVTPAFGFS SNFRTADLVG SDVIAAGDTV GITVFENVRD DPLLGNSGQR VSSLDQVQVD
GQGYIYVPYA GRIRAAGQTP DGLRQAITRK LDTQTPDPQV SVQRLAGDGS SVTVSGAVGS
QGVFPIERPT RTLSSMLARA GGTTVPVTTA IVRVTRKGST SQIWLQDLYD NPTLDIALRP
GDVIVVEEDD RSFVALGATG RQTRIQFETQ NVSAVEALAQ VGGLNTNLAD PKGVFVLRDE
PAEIANSVLG RTDLVGDQRM VYVLDLTQPT GLFEARDFMI RDGDTVYVTE APFVQWQKTL
SAITGATAAA NQAEAVGN