Gene Rsph17029_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2412 
Symbol 
ID4897791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2544872 
End bp2545345 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID640113010 
ProductNusB antitermination factor 
Protein accessionYP_001044286 
Protein GI126463172 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.325282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA AACCCGACAG GCGGCAGATG AAGTCGGCCT CGCGCCTCTA TGCGGTGCAG 
GCGCTCTTTC AGATGGAGAC CACCGGCCAG ACGGTCGAGC AGGTGGCGCG CGAGTTCGAG
ACCCACCGGT TCGGCGCCGT CTATGAAGGC GACGAGATGG CCGAGGGGGA TGCGAAGAGC
TTCCGGGCGA TCGTCTCGGG CGCGGTGAAC CGTCAGGCGG GCATCGACCA GATGACCGAC
CGGGCGCTGG TGGCCAAATG GCCCATCGAC CGGATCGACC CGGTGATCCG CGCGCTGTTC
CGCGCGGCGG GCTCGGAATT GCTCGAGAGC GAGACTCCGC CCAAGGTGGT CATCAACGAG
TTCGTCGATA TCGCCAAGGC CTTCTTCCCC GAGGGCCGCG AGCCGAAGTT CGTCAATGCG
GTCCTCGACC ACATGGCGCG CGAGGCCAGG CCCGAGGCTT TCCCGCAGGG CTGA
 
Protein sequence
MSVKPDRRQM KSASRLYAVQ ALFQMETTGQ TVEQVAREFE THRFGAVYEG DEMAEGDAKS 
FRAIVSGAVN RQAGIDQMTD RALVAKWPID RIDPVIRALF RAAGSELLES ETPPKVVINE
FVDIAKAFFP EGREPKFVNA VLDHMAREAR PEAFPQG