Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2357 |
Symbol | |
ID | 4897049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2493287 |
End bp | 2494393 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640112953 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001044231 |
Protein GI | 126463117 |
COG category | [R] General function prediction only |
COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.559782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0520062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGT CCCCGCTCAA CCAGCGCCGC TGGCGGAACT TCAAGGCGAA CCGGCGGGCC TATGTCTCGC TCTTCATCTT CTCGGTGCTC TTCGGCCTGT CGCTCTTCGC CGAGCTCATC GCCAACGACA AGCCGCTGCT CGTGAGCTAC CGCGGCAGCC TCTACACGCC CATCACCCAC TTCTACCCCG AGACCACCTT CGGCGGCGAT TTCCAGACCG AGGCCGCCTA TCGCGACCCC GAGGTGCGCT GCCTGATCCG CTCGGGCGGG CTCGACACCT GTTTCGACGA TCCCGAGGCG ATCCTTGCCG AGGCCGAGAC CGGCACGGTG GCGGGCGAGC CCATCGAGAA GGGCTGGATC CTCTGGCCGC TCATTCCCTA CAGCTACGAC ACGATCAACG ACATCGGCCG CGCGGCGCCC TCGCCGCCCG ATGCCGACCA CTGGCTCGGC ACCGACGACA CGGCGCGCGA CGTGCTGGCG CGGGTGATCT ACGGCTTCCG CCTGTCGGTG GCCTTCGCGC TGATCGTGAC CTTCCTCACC TCCGCCATCG GCATCGCCGC GGGCGCGGTG CAGGGCTATT TCGGCGGGCT TACCGACCTG ATCTTCCAGC GGGTGATCGA GCTCTGGGGC TCGACCCCCT CGCTCTATAT CATCATCATC GTGGCGGCGA TCTGGCAGAT GAACTTCTGG CTTCTCGTGG GCCTCATGGT GCTCTTCGGC TGGACGAGCC TGATCGGCGT GGTCCGGGCC GAGTTCCTGC GCGCGCGGAA CTTCGAATAT GTCCGCGCGG CCCGGGCGCT CGGCGTGTCG GATCTCGTCA TCATGTTCCG CCATGTGCTG CCCAACGCCA TGGTGGCCAC GCTGACCATG CTGCCCTTCA TCATCACCGG CACCATCGGC AGCCTCGCCG CGCTCGATTT CCTCGGCTTC GGGCTGCCCT CCTCGGCGCC GTCGCTCGGC GAGCTCACAC TGCAGGCCAA GCAGAACCTG CAGGCGCCGT GGCTGGGCTT CACCGCCTTC TTCGCCTTCG CCATCATGCT CTCGCTCATG GTGTTCATCT TCGAGGGCGT CCGCGATGCC TTCGACCCGA GAAAGACCTT CCGATGA
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Protein sequence | MALSPLNQRR WRNFKANRRA YVSLFIFSVL FGLSLFAELI ANDKPLLVSY RGSLYTPITH FYPETTFGGD FQTEAAYRDP EVRCLIRSGG LDTCFDDPEA ILAEAETGTV AGEPIEKGWI LWPLIPYSYD TINDIGRAAP SPPDADHWLG TDDTARDVLA RVIYGFRLSV AFALIVTFLT SAIGIAAGAV QGYFGGLTDL IFQRVIELWG STPSLYIIII VAAIWQMNFW LLVGLMVLFG WTSLIGVVRA EFLRARNFEY VRAARALGVS DLVIMFRHVL PNAMVATLTM LPFIITGTIG SLAALDFLGF GLPSSAPSLG ELTLQAKQNL QAPWLGFTAF FAFAIMLSLM VFIFEGVRDA FDPRKTFR
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