Gene Rsph17029_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2357 
Symbol 
ID4897049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2493287 
End bp2494393 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content66% 
IMG OID640112953 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001044231 
Protein GI126463117 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.559782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0520062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGT CCCCGCTCAA CCAGCGCCGC TGGCGGAACT TCAAGGCGAA CCGGCGGGCC 
TATGTCTCGC TCTTCATCTT CTCGGTGCTC TTCGGCCTGT CGCTCTTCGC CGAGCTCATC
GCCAACGACA AGCCGCTGCT CGTGAGCTAC CGCGGCAGCC TCTACACGCC CATCACCCAC
TTCTACCCCG AGACCACCTT CGGCGGCGAT TTCCAGACCG AGGCCGCCTA TCGCGACCCC
GAGGTGCGCT GCCTGATCCG CTCGGGCGGG CTCGACACCT GTTTCGACGA TCCCGAGGCG
ATCCTTGCCG AGGCCGAGAC CGGCACGGTG GCGGGCGAGC CCATCGAGAA GGGCTGGATC
CTCTGGCCGC TCATTCCCTA CAGCTACGAC ACGATCAACG ACATCGGCCG CGCGGCGCCC
TCGCCGCCCG ATGCCGACCA CTGGCTCGGC ACCGACGACA CGGCGCGCGA CGTGCTGGCG
CGGGTGATCT ACGGCTTCCG CCTGTCGGTG GCCTTCGCGC TGATCGTGAC CTTCCTCACC
TCCGCCATCG GCATCGCCGC GGGCGCGGTG CAGGGCTATT TCGGCGGGCT TACCGACCTG
ATCTTCCAGC GGGTGATCGA GCTCTGGGGC TCGACCCCCT CGCTCTATAT CATCATCATC
GTGGCGGCGA TCTGGCAGAT GAACTTCTGG CTTCTCGTGG GCCTCATGGT GCTCTTCGGC
TGGACGAGCC TGATCGGCGT GGTCCGGGCC GAGTTCCTGC GCGCGCGGAA CTTCGAATAT
GTCCGCGCGG CCCGGGCGCT CGGCGTGTCG GATCTCGTCA TCATGTTCCG CCATGTGCTG
CCCAACGCCA TGGTGGCCAC GCTGACCATG CTGCCCTTCA TCATCACCGG CACCATCGGC
AGCCTCGCCG CGCTCGATTT CCTCGGCTTC GGGCTGCCCT CCTCGGCGCC GTCGCTCGGC
GAGCTCACAC TGCAGGCCAA GCAGAACCTG CAGGCGCCGT GGCTGGGCTT CACCGCCTTC
TTCGCCTTCG CCATCATGCT CTCGCTCATG GTGTTCATCT TCGAGGGCGT CCGCGATGCC
TTCGACCCGA GAAAGACCTT CCGATGA
 
Protein sequence
MALSPLNQRR WRNFKANRRA YVSLFIFSVL FGLSLFAELI ANDKPLLVSY RGSLYTPITH 
FYPETTFGGD FQTEAAYRDP EVRCLIRSGG LDTCFDDPEA ILAEAETGTV AGEPIEKGWI
LWPLIPYSYD TINDIGRAAP SPPDADHWLG TDDTARDVLA RVIYGFRLSV AFALIVTFLT
SAIGIAAGAV QGYFGGLTDL IFQRVIELWG STPSLYIIII VAAIWQMNFW LLVGLMVLFG
WTSLIGVVRA EFLRARNFEY VRAARALGVS DLVIMFRHVL PNAMVATLTM LPFIITGTIG
SLAALDFLGF GLPSSAPSLG ELTLQAKQNL QAPWLGFTAF FAFAIMLSLM VFIFEGVRDA
FDPRKTFR