Gene Rsph17029_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2329 
Symbol 
ID4896334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2463447 
End bp2464244 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID640112925 
ProductTatD family hydrolase 
Protein accessionYP_001044203 
Protein GI126463089 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.493356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.509317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC AAATGCCCCC GCAGATCGTC GACAGCCACT GTCACCTGGA TTTCCCCGAC 
TTCGACGGCG AGCATGAGGC GCTGATCGCC CGCGCCCGCG CCGCCGGCGT CACGCGGATG
GTCACGATCT GCACCCGCCT GCGCCACGAG CCGCGGGTGC GCGCCATCGC CGAGGCGCAC
GAGGGCGTCT TCTACGCCGC GGGCACCCAT CCGATGAGCG CCGCCGAAGA GCCCATGGCC
ACCGTCGAGG AGCTGGTGGC GTTGGCCGCC CATCCGAAAT TCGTGGGCAT CGGCGAGACG
GGGCTCGACT ACCATTACAC GCCCGAGAGC GCGCCGGTGC AGCAGGAGAG CCTGCGCATC
CATATCGAGG CGGCGCGGCG CACGGGTCTG CCGCTCATCA TCCATGCGCG CGATGCGGAT
GCCGACATGG CGCGCATCCT GACCGAGGAG CATCGCGCGG GCGCCTACGG CTGCGTCATG
CACTGTTTCT CGTCGGGGCC GGAGCTGGCG CAGGCCGCGC TCGATCTGGG CTTCTACCTC
TCGATGTCCG GGATCGCGGC CTTCCCGAAA TCGGCCGAGC TGCGGGCGAT CTTCGCCGCG
GCTCCGCTCG AGCGCATCCT GCTCGAGACC GACAGCCCCT ATCTCGCCCC CCCGCCCTTC
CGCGGCAAGC GCAACGAGCC CGCCTACACC GCCCACACGG CCGCGAAGGG GGCCGAGGTC
TTCGGCCTCC CGCTCGCCGA CTTCGCCGCC GCCACCTCGG CCAATTTCGA CCGGCTCTTC
GCGAAGGCCG CCGCCTGA
 
Protein sequence
MTSQMPPQIV DSHCHLDFPD FDGEHEALIA RARAAGVTRM VTICTRLRHE PRVRAIAEAH 
EGVFYAAGTH PMSAAEEPMA TVEELVALAA HPKFVGIGET GLDYHYTPES APVQQESLRI
HIEAARRTGL PLIIHARDAD ADMARILTEE HRAGAYGCVM HCFSSGPELA QAALDLGFYL
SMSGIAAFPK SAELRAIFAA APLERILLET DSPYLAPPPF RGKRNEPAYT AHTAAKGAEV
FGLPLADFAA ATSANFDRLF AKAAA