12 homologs were found in PanDaTox collection
for query gene Rsph17029_2155 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009049  Rsph17029_2155  HupK  100 
 
 		 270 aa  508  1e-143  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.127907 
 
 
-
 
NC_007493  RSP_0504  HupK  94.44 
 
 		 270 aa  477  1e-134  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3367  rubredoxin-type Fe(Cys)4 protein  62.22 
 
 		 270 aa  312  2.9999999999999996e-84  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.391965 
 
 
-
 
NC_008687  Pden_3106  HupK  38.21 
 
 		 300 aa  129  7.000000000000001e-29  Paracoccus denitrificans PD1222  Bacteria  normal  0.628354  normal  1 
 
 
-
 
NC_009720  Xaut_2181  putative hydrogenase expression/formation protein HupK  34.21 
 
 		 329 aa  77.4  0.0000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.124929  normal  0.212664 
 
 
-
 
NC_010581  Bind_1158  putative hydrogenase expression/formation protein HupK  34.53 
 
 		 329 aa  56.6  0.0000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.846378  normal  1 
 
 
-
 
NC_011094  SeSA_A1636  putative dehydrogenase protein  28.47 
 
 		 295 aa  48.5  0.0001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2497  Ni,Fe-hydrogenase I large subunit  28.26 
 
 		 379 aa  47.8  0.0002  Magnetococcus sp. MC-1  Bacteria  normal  0.633578  normal  0.13514 
 
 
-
 
NC_007973  Rmet_1287  hypothetical protein  40 
 
 		 384 aa  45.1  0.001  Cupriavidus metallidurans CH34  Bacteria  normal  0.272363  normal  0.489405 
 
 
-
 
NC_011083  SeHA_C1703  putative ATP/GTP-binding protein  29.17 
 
 		 295 aa  43.5  0.004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.746184  normal  1 
 
 
-
 
NC_011205  SeD_A1804  putative dehydrogenase protein  27.87 
 
 		 295 aa  43.5  0.004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0688891  normal  1 
 
 
-
 
NC_008825  Mpe_A2817  HupK protein  34.23 
 
 		 388 aa  42.7  0.006  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>