| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2118 |
|---|
| Symbol | |
|---|
| ID | 4896131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2246018 |
|---|
| End bp | 2246542 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640112712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001043993 |
|---|
| Protein GI | 126462879 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3154] Putative lipid carrier protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.130953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.854449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTC TGCCCACGCT CGCCCCGCCG CTTTCGCGGC TGGTGGGGCT TTTGCCGAAG
CCGCCGGCCT CCGTCGCGCT GACGCTGCTC GCCCGCCGCA TCGCCGCCCG CCACCCCGAG
ATCGTCGGAA GGCTGGGCAC GCATGTGAAT GCGAGCTTTG CGCTCGACCC GACCGACCTG
CCGGTGGTGA TGATCCTCAC CCTGCCTGCG GGACAGCCGC GCATCCGGCT GCAGAAGGAC
GCCTCGGGCG CCGATTGCCG CATCGCGGGC AAGCTCTCGG CGCTGCTCGC GCTGGTGCAC
GGGGCGGTGG ACGGCGACGC GCTCTTCTTC TCGCGCGACC TCGTGATCGC GGGCGACACG
GCGGCGGCGC TGGCGCTGCG CAACGCCATC GACAATGCCG AACTCGACCT GCTGGAGGAG
ATCCAGCATG TGGCGCCGCC GCTTGCGCGC GCCCTGGCCC CCATCGCGGC CGCCCTTGAA
CGTCAAACCG GCGTGGCCCT GCGCCGCGCC TCGGGAGTGA TCTGA
|
|---|
| Protein sequence | MTSLPTLAPP LSRLVGLLPK PPASVALTLL ARRIAARHPE IVGRLGTHVN ASFALDPTDL
PVVMILTLPA GQPRIRLQKD ASGADCRIAG KLSALLALVH GAVDGDALFF SRDLVIAGDT
AAALALRNAI DNAELDLLEE IQHVAPPLAR ALAPIAAALE RQTGVALRRA SGVI
|
|---|
| |