Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2057 |
Symbol | |
ID | 4896601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2180079 |
End bp | 2181365 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640112650 |
Product | homoserine dehydrogenase |
Protein accession | YP_001043932 |
Protein GI | 126462818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCCC CCCTGCGTCT TGGTATTGCC GGTCTCGGCA CCGTCGGTAT CGGGGTGGTC AAGATCATCC AGCGTCACGC CGACCTGATC GCCGCCCGCG CAGGACGCCC GGTCATCATC ACCGCCGTCT GCGCCCGCGA CCGGTCGAAG AACCGCGATG CCGATCTCTC GGGCTACGCC TGGGAGACGG ATGCGGTGGC GCTGGCACAG CGCGCGGATA TCGACGTGTT CGTCGAGGTC ATGGGCGGCT CGGAAGGGGC GGCGCGCGCC TCGACCGAGG CCGCGCTGGC CGCCGGCAAG GATGTGGTGA CCGCGAACAA GGCGCTTCTT GCCCATCACG GGCAGGCGCT GGCCGAGATG GCCGAAGCTG CGGGCCTCGC CATCCGGTTC GAGGCGGCCG TCGCGGGCGG CATCCCGGTC ATCAAGGCGC TGACCGAGGG GCTCGCCGGC AACCAGATGC GCCGGGTGAT GGGCGTCATG AACGGCACCT GCAACTACAT CCTGACCCGG ATGGAGACCG CGGGCCTGCC CTACGACCAT GTCTTCGAGG AGGCCCGCCA GCTCGGCTAT CTCGAGGCCG ACCCGAACCT CGATGTCGGA GGGATCGACG CGGGCCACAA GCTCTCGCTT CTGGCCGCGA TCGCCTTCGG CACCCGCGTC AGCTTCGACG ACGTGCAGCT CGAGGGGATC GGCCAGATCT CGATCGACGA CATCCGCCAT GCGGGCGACC TCGGCTTCCG CATCAAGCTT CTGGGCGTGG CGCAGGTGTC GGGCCGCGGG CTCGAGCAGC GGATGACCCC CTGCCTCGTG CCCGCCGACA GCCCGCTCGG CCAGCTTCAG GGCGGCACCA ACATGGTGGT GCTCGAAGGA GACGCGGTGG GCCAGATCGT GCTGCGCGGC CCCGGCGCGG GCGAAGGCCC CACCGCCAGC GCCGTGATGG GCGACGTGAT CGACCTCGCG CGCGGACTGC GCCTGCCCAC CTTCGGCCGC CCCGCCACGA GCCTCGTCGA GGCGGTGCCC GCCAAGGTCG CGGCGCCCGC GCCTTGGTAT CTGCGCATGA CGCTCCTCGA CAAGCCGGGG GCGCTGGCCA AGATCGCGAC CGCGCTCGGC GAGGCCGGCA TCTCCATCGA CCGGATGCGC CAGTATGGCC ACGAGGGCGG CCACGCCCCG GTGCTGATCG TCACCCACAA GGCCTCTCGC GACGACATTT CCCACGCGAT CAGCCGGTTC GGGGCCACGG GCGTCCTCGT CGGCGAACCT GTGGCGATCC GCATCGAAGA GGTTTGA
|
Protein sequence | MAAPLRLGIA GLGTVGIGVV KIIQRHADLI AARAGRPVII TAVCARDRSK NRDADLSGYA WETDAVALAQ RADIDVFVEV MGGSEGAARA STEAALAAGK DVVTANKALL AHHGQALAEM AEAAGLAIRF EAAVAGGIPV IKALTEGLAG NQMRRVMGVM NGTCNYILTR METAGLPYDH VFEEARQLGY LEADPNLDVG GIDAGHKLSL LAAIAFGTRV SFDDVQLEGI GQISIDDIRH AGDLGFRIKL LGVAQVSGRG LEQRMTPCLV PADSPLGQLQ GGTNMVVLEG DAVGQIVLRG PGAGEGPTAS AVMGDVIDLA RGLRLPTFGR PATSLVEAVP AKVAAPAPWY LRMTLLDKPG ALAKIATALG EAGISIDRMR QYGHEGGHAP VLIVTHKASR DDISHAISRF GATGVLVGEP VAIRIEEV
|
| |