| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1907 |
|---|
| Symbol | |
|---|
| ID | 4895137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2019670 |
|---|
| End bp | 2020626 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640112501 |
|---|
| Product | chlorophyll synthesis pathway, BchC |
|---|
| Protein accession | YP_001043783 |
|---|
| Protein GI | 126462669 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.274753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.343747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAACGA CCGCCGTCAT CCTGTCGGGT CCGCGGGACC TTGGCCTTCA GACCATCCAG
CTGAACGAGC CCGCGCCCGG CGATATCGTC GTCGAGATCA CCCATTCGGG CATTTCGACG
GGCACCGAAA AACTGTTCTA CACCGGCCAG ATGCCGCCCT TTCCGGGCAT GGGCTACCCG
CTGGTGCCGG GCTACGAGGC CGCCGGCGAA GTGGTCGAGG CCGCGCCCGA TACGGGCTTC
CGGCCGGGCG ACCGGGTCTT CGTGCCGGGC TCCAACTGTT TTGCGCCGAC CGATGCGGGG
CCGATCCGCG GCCTGTTCGG AGCGGCGACG AAGCGGCTCG TGACGCCCGC CCATCGCGCC
GTGCGCATCG ATCCTGCGCT CGAGGCCGAG GGGGCGCTTC TGGCGCTTGC CGCGACCGCG
CGCCATGCGC TGGCCGGGCT GAACCATGTG CTGCCGGACC TGATCGTGGG TCACGGCACG
CTGGGCCGGC TGCTCGCGCG TCTGACCATT GCCGCGGGCG GCGAGCCGCC GGTGGTCTGG
GAGACCAAGG CGGAACGGCG CCGCCATGCC GAGGGCTACG AGGTCATCGA CCCCGCGACC
GACCAGCGCC GCGACTACCG CTCGATCTAC GATGCGTCGG GCGATCCGAA ATTGATCGAC
AGTCTGGTGA TGCGGCTTGC CAAGGGCGGC GAGATCGTGC TGGCGGGCTT CTATACCGAA
CCCGTTGCCT TCACCTTCGT GCCCGCCTTC ATGAAGGAGG CGCGCCTGCG CATCGCTGCC
GAGTGGCAGC CCGAGGACAT GGTGGCCACC CGCGCGCTGA TCGAGAGCGG GGCGCTTTCG
CTTGCCAATC TGATCACCCA CACCCGACCG GCGTCGGAGG CGGCCGAGGC CTACGCCACG
GCCTTCAGCG ACCCCGACTG TCTCAAGATG ATCCTGGATT GGAGGGCCAC CGCATGA
|
|---|
| Protein sequence | MRTTAVILSG PRDLGLQTIQ LNEPAPGDIV VEITHSGIST GTEKLFYTGQ MPPFPGMGYP
LVPGYEAAGE VVEAAPDTGF RPGDRVFVPG SNCFAPTDAG PIRGLFGAAT KRLVTPAHRA
VRIDPALEAE GALLALAATA RHALAGLNHV LPDLIVGHGT LGRLLARLTI AAGGEPPVVW
ETKAERRRHA EGYEVIDPAT DQRRDYRSIY DASGDPKLID SLVMRLAKGG EIVLAGFYTE
PVAFTFVPAF MKEARLRIAA EWQPEDMVAT RALIESGALS LANLITHTRP ASEAAEAYAT
AFSDPDCLKM ILDWRATA
|
|---|
| |