Gene Rsph17029_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1813 
Symbol 
ID4896811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1912745 
End bp1913596 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID640112407 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001043692 
Protein GI126462578 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.210707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.296576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG TGTTCCTCGC CCTCGTCACC TGGGTCGTGA CGCTCGTGCT CAATGTGCGG 
ATCTCGCGGT CGGCCTTCTC CGAGACGCGG ATCGGCCGCC TCGTGGTGCC CGCGATCTTC
GGGCTCACCG TGCTTCTGGT CTGGGAGCTG CTGGTGCGCG GGCTTCAGGT GCCCTCGGTG
ATCCTGCCGC CGCCCTCTGC CATCGGCACG CGGATCGCGA GAAGCCTGCC GGTCCTCTGG
GGCGATTTCG TGCAGACCTT CGTGAAGGGC GCGCTCTCGG GCTGGCTCAT CGGCTGTGCG
GCCGCGGTGG CCACGGCCAT CGCCATCGAC CGCTCGCCCT TCCTGCAGCG GGGGCTGCTG
CCGGTGGGCA ATTTCGTGGC GGCCCTGCCC ATCGTGGGGA TCGCGCCGAT CCTCGTCATG
TGGTTCGGCT TCGACTGGCA GTCGAAGGCC GCGGTGGTGG TGGTCATGGT CTTCTTCCCC
GTGCTCGTGA ACACGGTCGA GGGGCTCGCG GCCACCGACC GGATGCAGCG CGACCTGATG
AAGACCTATT CGGCCAGCTA CGCCCAGACG CTCCTCAAGC TGCGGCTGCC CGCGGCCATG
CCCTTCATCT TCAACGGCCT GAAGATCGCC ACAACGCTCG CCCTGATCGG GGCCATCGTC
GCCGAATTCT TCGGCAGCCC GATCCGCGGC ATGGGCTTTC GCATCTCGGC CGAGGTCGGC
CGCCTCGGGC TCGACATGGT CTGGGCCGAG ATAGCGGTTG CAGCACTGGC GGGCTCGGCC
TTCTATGGGG TGGTCGCTCT GGTCGAACGA GGGCTGACCT TCTGGCACCC GTCCCAACGA
CGTCAACGAT AG
 
Protein sequence
MTLVFLALVT WVVTLVLNVR ISRSAFSETR IGRLVVPAIF GLTVLLVWEL LVRGLQVPSV 
ILPPPSAIGT RIARSLPVLW GDFVQTFVKG ALSGWLIGCA AAVATAIAID RSPFLQRGLL
PVGNFVAALP IVGIAPILVM WFGFDWQSKA AVVVVMVFFP VLVNTVEGLA ATDRMQRDLM
KTYSASYAQT LLKLRLPAAM PFIFNGLKIA TTLALIGAIV AEFFGSPIRG MGFRISAEVG
RLGLDMVWAE IAVAALAGSA FYGVVALVER GLTFWHPSQR RQR