Gene Rsph17029_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1713 
Symbol 
ID4897778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1807946 
End bp1808614 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID640112306 
Productflagellar L-ring protein 
Protein accessionYP_001043595 
Protein GI126462481 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.640514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.230942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCC GCATGTCCCT CATCGCGCTG GCCCTGCTGC TCGCGCCCGC CGCCTGCTCG 
ACCTATGTCG AGGACCGCGC CTCCGAGGCC TGGGCCCCGG TCTATCCGGT CGAGGAGGCC
GAGCGGCTCG ACAGCCTGCC CACCGGCGGG ATCTACAGCA GCACCTCCCG CGGCCTCTTC
GTCTCGGACC GGCGCGCGGC GCGGGTGGGC GACATCGTGA CGGTGGATTT CGACGAGAAA
TTCTCGGCCT CGAAGTCGCA GAGCGCCTCG GGCTCGCGCA AGAGCGATTA TGCGATCGAC
CTGCCCGATG CGCTCACGCT GGGGCTCGAC GACGGGGTGC TCGACAATTC GACCGATCAG
GGCTTTTCGG GCAAGGGGGC GGCCTCGCAG TCGAACTCGC TGCGCGGGCG GATGTCGGTC
TCGGTCACGC GCGTGCTGCC GGGCGGCAAT CTCGAGATCA TGGGCCAGAA GCTCCTCACG
CTGAACAACG GCAACGAATA TGTCCGGCTG AAGGGCGTGG TGCGCCCCGA GGACATCGGG
CCGGACAATG TGGTGACCTC GGACCGGATC GCCCATGCCG AGATCAAGTA TATCGGTGCG
GGCGACACTG CCGACACCGC GAAGCCCGGC TGGCTGCGGC GCGGCCTTTC CGTGGTCTCG
CCGCTGTGA
 
Protein sequence
MSRRMSLIAL ALLLAPAACS TYVEDRASEA WAPVYPVEEA ERLDSLPTGG IYSSTSRGLF 
VSDRRAARVG DIVTVDFDEK FSASKSQSAS GSRKSDYAID LPDALTLGLD DGVLDNSTDQ
GFSGKGAASQ SNSLRGRMSV SVTRVLPGGN LEIMGQKLLT LNNGNEYVRL KGVVRPEDIG
PDNVVTSDRI AHAEIKYIGA GDTADTAKPG WLRRGLSVVS PL