Gene Rsph17029_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1684 
Symbol 
ID4896587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1776135 
End bp1777334 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content72% 
IMG OID640112277 
Productputative CheA signal transduction histidine kinases 
Protein accessionYP_001043566 
Protein GI126462452 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.300413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0019378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGC CTGTCGAGGC CGGTCCCGAC GGCGGGCTCC TGCGCGTCTC CTCCGAGAAG 
ATCGGCCGGC TCATGGATCT CGTGGGCGAG CTCTCGCTTT CGGTGGCCGA GACGGTCCAT
TCGCCCGATC TGGAAGGGCT GGAGCTTCCC GCCTTCGACG GGGCCGTCCA CCGGCTCCGG
ATGATCGTGC GCGAGGTGCA GGATGCCGCG ACCGAGCTCA GGCTCGTGCC GGTCGAGGAG
GTGTTCAAGC GCCTCCGCCG GATGGTGCGC GAACTCGAGC GGCAGACGGG CAAGAAGATC
GAGATGGTCT TCGAGGGCGC CGAGACGGCG ATCGACAAGC TCGTGGCCGA CCAGCTCTAC
GACCCGCTCC TCCATGTGGT GCGCAACTCG GCCGATCACG GGCTCGAACC GCCCGAGGAG
CGCCGGGCGG CGGGCAAGCC CGAGACGGGA CGGATCGTGC TCGCGGCCGC GCAGGCGGGC
TCGGAGGTGC GGATCTCGGT GTCCGACGAC GGGCGCGGTC TCTCGCGGCC GAAGATCCTG
AAGCGCGCGC GCGAGCGCGG CCTCTTCGGC CCCGACGAGG AGCCCGAGCC CGCGACCCTC
TGGAAGGTGA TCTTCGAGCC CGGCTTCTCC ACCGCCGAGG CGGTGACGAA CCTCTCGGGC
CGCGGGGTGG GGATGGATGT GCTCAACGCC ACCATGACCG CCCTGCGCGG CCGCATCGGC
GTCGACAGCC GCGACGGGCA GGGCAGCGAG GTCTCGCTCC ACATTCCCGT CTCGCTGGCC
TTCCTCGATT GCATCATCCT GCGACTGGGC GCGCGGCTCT ATGCGCTGCC CATCGACGCG
GTGTCCGAGA TCGTGCAGCC GAAGCCCTGC GACCTGATGG GCGTGGGCGC CGCGGGCGGC
TCCGAGATGC TGAGGCTCCG CGGCCACTGG ATCCCGGTCT GCCGGCTCGA GCGGTTCTAC
GGCGAGGCAC CCTCGGCGGT CCCTCCGCCG GCGGGGCAGG TGCTGGCCGT GGTCAGCACC
GCCACAGGCC TCATCGCGCT GCCGGTCGAC GAGGTGCTCG ACCGCCAGCA GGTGGTGATG
AAACCGCTCA CCGGCCGCCT TGCGCAGGTC CGCGCCAGCT GGGGCTGCGC GCTTCTCGGC
ACCGGCGAGG TGGCGCTCGT GCTCGACGGC AACCGCCTCG CGGCGGGAGG TGCGGCATGA
 
Protein sequence
MSAPVEAGPD GGLLRVSSEK IGRLMDLVGE LSLSVAETVH SPDLEGLELP AFDGAVHRLR 
MIVREVQDAA TELRLVPVEE VFKRLRRMVR ELERQTGKKI EMVFEGAETA IDKLVADQLY
DPLLHVVRNS ADHGLEPPEE RRAAGKPETG RIVLAAAQAG SEVRISVSDD GRGLSRPKIL
KRARERGLFG PDEEPEPATL WKVIFEPGFS TAEAVTNLSG RGVGMDVLNA TMTALRGRIG
VDSRDGQGSE VSLHIPVSLA FLDCIILRLG ARLYALPIDA VSEIVQPKPC DLMGVGAAGG
SEMLRLRGHW IPVCRLERFY GEAPSAVPPP AGQVLAVVST ATGLIALPVD EVLDRQQVVM
KPLTGRLAQV RASWGCALLG TGEVALVLDG NRLAAGGAA