| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1437 |
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| Symbol | |
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| ID | 4896444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1490987 |
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| End bp | 1492798 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640112025 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001043319 |
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| Protein GI | 126462205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0112279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAGG AATTCCGGTC CCGCCTGAGG GGCGCCGCGA TGGCTCTCGG GCTTGCCGTT
CTGGGCACGA CGCTGGCCGC CGAACCCCGG CACGGCATAG CTATGTATGG CGAACCGGCG
CTTCCACCGG ATTTTGTGTC TCTGCCATAT GCAAATCCCG ACGCGCCGAA GGGCGGCCGG
ATCGTGCTGG GCGAGACGGG CGGATTCGAT TCCCTCAACC CCTACATCGT GAAGGGTCGC
GCCCCCTATT CGCTCGCGCC GCTGACGGTC GAGACGCTGC TCGGCCGGTC GCTCGACGAG
CCCTTCACGC TCTACGGGCT TCTGGCCGAA TCGGTCGAGA CGGACCCCGC CCGGACCTGG
GTCGAATTCA CGCTGCGCGA GGGCGCGCGG TTCTCGGACG GCACGCCCGT GACGGTCGGG
GATGTGCTCT GGTCGTTCGA GATTCTCGGC ACGAAAGGGA TGCCGCGCTA CTGGGGCGCG
TGGCAGAAGA TCGCGAGCGC CGAGCAGACG GGCCCGCGCT CGGTCCGCTT CACCTTCTCC
GAGCAGGACC GCGAACTGCC GCTGGTGCTG GGTCTGCGCC CGATCCTGAA GAAGGCGCAG
TGGGAGGGGC GCGACTTCGG CTCCTCGGGC TTCGAGGCGC CGATCGGCTC GGGCCCTTAC
ATCCTCGAGA GCTTCGAGCC GGGCCGGGTG CTGCGCTACC GCCGGAACCC CGACTGGTGG
GGGCGCGACC TGCCCTTCAA CCGCGGCCTG CACAATCTCG ACGAGGTGGT GGTCGAGTAT
TTCGGCGATG CGAGCGTGGC CTTCGAGGCG TTCAAGGCCG GCGCCCTCTC GGTCTATCGC
GAGACGAGCG CCGCCCGCTG GGCCACTCAC TACGGCTTCC CGGCCGTGCA GAGCGGCGCG
ATGGTCAAGT CCGAGATCCC GCATGGCCGC CCGTCCGGAA TGGAGGGGCT GGTGATGAAC
ACGCGCCGCG CCCCTTTCGC GGACTGGCGC GTGCGCGAGG CGATGCTCTT GGCCTTCGAC
TTCGACCTCA TCAACCGCAC GCTGACCGGC GGCGCCGAGC CGCGGATCGC CTCCTACTTC
TCGAACTCCG CGCTCGGGAT GGAGGCGGGG GCGCCTGCCA CGGGGCGCGA GCGGGCGCTG
CTCGAGCCCT TTGCGGCAGA TCTGCTGCCC GGCACGCTCG ACGGCTATGC CCTGCCCGCC
ACGCACGGCG CCTCGAACCG CGGCAACCTC CGCAAGGCCG CCCGGCTTCT CTCGGAGGCC
GGCTGGCGGA TCGAGGACGG GATGCTGGAA GGCCCCGGCG GCGAGCCCTT CGCCTTCGAG
ATCCTGCTGC CGCAGGGCGC GGATGCGATG ATCGCGGCCG CGATCATCTA CCGGCAGGCC
CTGACGCGGC TCGGGATCTC GGCCCGCATC ACGACCGTCG ATCCGGCGCA GTTCAAGCAG
CGGGTCGACA ATCAGGATTT CGACATGACG AGCTTCCTGC GCTCGCTCAC CCTCTCGCCC
GGCAACGAGC AGCTCCTCTA CTGGTCGGCC GAGGACAAGG ATCTGCCCGG CTCGCGCAAC
CTGATGGGGA TGGAGAGCCC CGCCGCCGAG GCCGTGATCC GGCACATGCT GGCCACCGAC
GATGCCGAGG AGTTTCAAGC CTCCGTGAGG GCGCTCGACC GGGTCCTGAC CGCCGGTAGA
TATGTCATTC CGATGTGGTA TTCTCGGGTC TCCCGGCTGG CGCACGACAG GCACCTGCGC
TATCCGGCAA AAACACCCAT CTATGGCGAC TGGCCGGGCT TCCTGCCGGA CGTCTGGTGG
CAAGAAAAGT GA
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| Protein sequence | MIQEFRSRLR GAAMALGLAV LGTTLAAEPR HGIAMYGEPA LPPDFVSLPY ANPDAPKGGR
IVLGETGGFD SLNPYIVKGR APYSLAPLTV ETLLGRSLDE PFTLYGLLAE SVETDPARTW
VEFTLREGAR FSDGTPVTVG DVLWSFEILG TKGMPRYWGA WQKIASAEQT GPRSVRFTFS
EQDRELPLVL GLRPILKKAQ WEGRDFGSSG FEAPIGSGPY ILESFEPGRV LRYRRNPDWW
GRDLPFNRGL HNLDEVVVEY FGDASVAFEA FKAGALSVYR ETSAARWATH YGFPAVQSGA
MVKSEIPHGR PSGMEGLVMN TRRAPFADWR VREAMLLAFD FDLINRTLTG GAEPRIASYF
SNSALGMEAG APATGRERAL LEPFAADLLP GTLDGYALPA THGASNRGNL RKAARLLSEA
GWRIEDGMLE GPGGEPFAFE ILLPQGADAM IAAAIIYRQA LTRLGISARI TTVDPAQFKQ
RVDNQDFDMT SFLRSLTLSP GNEQLLYWSA EDKDLPGSRN LMGMESPAAE AVIRHMLATD
DAEEFQASVR ALDRVLTAGR YVIPMWYSRV SRLAHDRHLR YPAKTPIYGD WPGFLPDVWW
QEK
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