| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1366 |
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| Symbol | |
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| ID | 4896945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1419994 |
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| End bp | 1421178 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640111953 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001043248 |
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| Protein GI | 126462134 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.979835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0138688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCC TGTCGATCTT TGGGGCCACC GGCTCCATCG GCGAATCCAC CTTCGACCTC
GTCATGCGGA AGGGCGGGCC CGAGGCGTTC CGCACCGTCG CTCTGACCGG CGGGCGCAAC
ATCCGGCGGC TCGCCGAAAT GGCGCGCGCG CTGAAGGCGG AGCTCGCCGT CACCGCGCAT
GAGGATTGCC TGCCCGCGCT GCGCGAGGCG CTGGCCGGGA CGGGCACCGA GGTCGCGGGC
GGGGCGCAGG CCATCGCCGA GGCCGCCGAC CGGCCCGCCG ATTGGACCAT GTCGGCCATC
GTGGGCGCCG CGGGCCTCGT GCCCGGAATG CGGGCTCTGA AGCATGGCCG CACGCTGGCG
CTCGCCAACA AGGAAAGCCT CGTGACGGCA GGGCAGCTCC TGATGCGCAC GGCCGAGGAG
AACGGCGCCA CGATCCTGCC GGTGGACAGC GAGCACTCCG CGGTCTTTCA GGCGCTGGCG
GGTGAGGACA CGGCCTGCGT CGAGCGCGTC ATCATCACGG CGTCCGGCGG GCCGTTCCGC
GACTGGAGCC TCGAGCGCAT CCGCGCCTGC ACCGTGGCCG AGGCGCAGGC CCATCCCAAC
TGGTCCATGG GCCAGCGGAT CTCCATCGAC AGCGCCTCGA TGTTCAACAA GGCGCTCGAG
CTGATCGAGA CGCGCGAATT CTTCGGCTTC GAGCCGGACC GGATCGAGGC GGTCGTCCAT
CCGCAATCCA TCGTCCACGC GATGGTGGGC TTCTGCGACG GGGGCCTCAT GGCCCATCTC
GGCCCGGCCG ACATGCGCCA CGCCATCGGA TTCGCGCTGA ACTGGCCCGG ACGCGGCGAG
GTGCCGGTCG CCCGGATCGA CCTCGCACAG ATTGCGAGCC TCACCTTCCA GAAGCCTGAC
GAGGAACGCT TTCCGGCCCT GAGGCTTGCG CGAGACGTCA TGGCGGCGCG CGGCCTGTCG
GGCGCCGCCT TCAACGCGGC CAAGGAGATC GCGCTCGATC ATTTCATCGC CGGTCGCATC
GGGTTTCTGG ACATGGCGGC GGTGGTCGAG GAGACCCTCG CGGGCGTTTC GACCGACCCC
CTGTTCGGAA AAGTGCCCGA CGCCCTTGAG GAAGTGCTGG CCATGGACCA TCTCGCTCGG
AGAGCGGCAG AGGAAGCCGC CGGTCTCCGC CAGCAGAAAA GGTAG
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| Protein sequence | MRSLSIFGAT GSIGESTFDL VMRKGGPEAF RTVALTGGRN IRRLAEMARA LKAELAVTAH
EDCLPALREA LAGTGTEVAG GAQAIAEAAD RPADWTMSAI VGAAGLVPGM RALKHGRTLA
LANKESLVTA GQLLMRTAEE NGATILPVDS EHSAVFQALA GEDTACVERV IITASGGPFR
DWSLERIRAC TVAEAQAHPN WSMGQRISID SASMFNKALE LIETREFFGF EPDRIEAVVH
PQSIVHAMVG FCDGGLMAHL GPADMRHAIG FALNWPGRGE VPVARIDLAQ IASLTFQKPD
EERFPALRLA RDVMAARGLS GAAFNAAKEI ALDHFIAGRI GFLDMAAVVE ETLAGVSTDP
LFGKVPDALE EVLAMDHLAR RAAEEAAGLR QQKR
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