Gene Rsph17029_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1333 
Symbol 
ID4896720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1382002 
End bp1382913 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID640111920 
Producttransport-associated 
Protein accessionYP_001043215 
Protein GI126462101 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.286279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAT CGAGATTTGA CGCCCGGAAC CGGAACTGGG ACGAGGACGC GGACATGCAG 
CGCTATGGTG GCGACCGGTC ACGGGGCAAC CGCGAAGACG ACCCGCGCCT GCGCGGCGGC
CCCGAGGACC GCAATCGCGA TCGCTTCGAT GCCCGGTATC AGGACCGGGG TCAGGACGAG
GCACGCGGGG CAGAGCGCGA CCGCTCTTCC GGCGGCGGAA TGGATGCCGC GAGCGGCTAC
GGCTTCGGCG CCGCCGGGTT CGATCCGCGC GACCGCGACG ACCGGCGCGG CGGCAACGAC
CGCTCGGATC GCGACTACGG ATCGGAGCGC CGCTCGCAGG ACGAGCGCTC GTGGGGCTAC
GGCCCGCAGA TCGGCCGGGA ATGGGACCGT CGCGGCCAGA GCTATGACGA GCGTCACGGA
CGGGGCGGCC CCCGCTTCTA CGATTCCGCC GGCGAACGCG GCTTCATGGA CCGTGCGGCG
GACGAGGTCA TGTCCTGGAT GGGCGACGAC GAGGCGGGCC GTCGCCGCGA GGAGGATCAC
CGCGGCAAGG GTCCGCGCGG TTACCAGCGG TCGGACACGC GCATCCACGA CGATGTGAAC
GACCGTCTCA GCGACGATCC GCGCCTCGAC GCCTCCGACA TCGACGTCTC GGTGGCGGGC
GGCGAAGTCA CGCTGAACGG TCACGTTTCG ACGAAGATGG ACAAGCGCCG TGCAGAAGAT
TGCGCGGATA CGGTCTCGGG CGTGCGCCAT GTGCAGAACA ACCTGCGCGT CCGCGAGAGC
GGCACGGGCG GCTCCGGGAC GGGCCCGTTC GGCGGAAGCT CGTCCGGTCA GTCGGGCGGC
GGGCTCTCGG GCTCCGGCGC CACCGACGCC GGTCTCGGCG ACCAGAGCGG CAAGCGCGGC
ACGCAGGCCT GA
 
Protein sequence
MAQSRFDARN RNWDEDADMQ RYGGDRSRGN REDDPRLRGG PEDRNRDRFD ARYQDRGQDE 
ARGAERDRSS GGGMDAASGY GFGAAGFDPR DRDDRRGGND RSDRDYGSER RSQDERSWGY
GPQIGREWDR RGQSYDERHG RGGPRFYDSA GERGFMDRAA DEVMSWMGDD EAGRRREEDH
RGKGPRGYQR SDTRIHDDVN DRLSDDPRLD ASDIDVSVAG GEVTLNGHVS TKMDKRRAED
CADTVSGVRH VQNNLRVRES GTGGSGTGPF GGSSSGQSGG GLSGSGATDA GLGDQSGKRG
TQA