| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1277 |
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| Symbol | mnmA |
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| ID | 4896313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1320356 |
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| End bp | 1321495 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640111864 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001043159 |
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| Protein GI | 126462045 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.386625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.268011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC ATCCGCTCAA TTCGCTGGGT TTCGCCAAGC CCCCCGCCGC CACCCGCGTG
GTGGTGGCCA TGTCGGGCGG CGTCGACAGT TCCGTGGTGG CGGCCGAGCT CGCCGCCGAG
GGCTACGATG TGGTGGGCGT CACGCTCCAG CTCTACGACC ATGGCGCGGC GCTGGCCAAG
AAGGGCGCCT GCTGCGCCGG GCGCGACATC CATGACGCGC GCCGCGTGGC CGAGACGATG
GGCTTTCCCC ATTATGTGCT CGATTACGAG AACACCTTCC GCGAGGCGGT GATCGACGAA
TTCGCCGACG CCTACCTGGC CGGGGCCACG CCTGTGCCCT GCATCCGCTG CAACGAACGG
GTGAAGTTCA AGGACCTGCT GCAGACGGCG AAGGATCTCG ACGCCGACTG CATGGCGACG
GGCCACTATA TCCAGCGCAA GATGGGCCCG GCGGGGCCCG AGCTGCACTG CGCGGCCGAT
GCCGCGCGCG ACCAGAGCTA TTTCCTCTTC TCGACCACGC CCGAGCAGCT GGCCTTCCTG
CGCTTCCCGC TCGGCCATCT CGCCTCGAAG GCCGAGACCC GCGCGCTGGC CGCGCGGCAC
GGACTGCCCG TGGCCGACAA GCCCGACAGC CAGGACATCT GCTTCGTGCC GAACGGCAAC
TATGCCGAGG TGATCCAGAA GCTGCGCCCC GGCGCGGCCG ACCCGGGCGA GATCGTGGAT
CTCTCCGGCC GGGTGCTCGG CGAACATCGT GGCGTCATCC ACTACACGAT CGGCCAGAGA
CGGGGACTCG GCATCGGCGG CCTCGGCGAT CCGCTCTATG TGGTGCGGCT CGATCCCGAG
CGGCGTCAGG TGATCGTGGG CCCGAAAGAG GCGCTTTCGA CCCGGATCGT CCCGGTGCGC
GAGATCAACT GGCTGGGCGA TGCCCCGCTC ACCTCCCGCT CCGAATGGCA GGTGATGGCC
AAGGTGCGCT CCACCCGGGC CCCGCGCGAG GCGGTGATCC GCCCGCTGTC GGACACCGAG
GCCGAGGTGG AACTGATCGC CCCCGAGGAC GGCGTCTCGC CGGGTCAGGC CTGCGTCTTC
TACGCGCCGG GCGACAGCCG CATTCTGGGC GGCGGCTGGA TCTGGCGCGG CGCCCGCTGA
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| Protein sequence | MLDHPLNSLG FAKPPAATRV VVAMSGGVDS SVVAAELAAE GYDVVGVTLQ LYDHGAALAK
KGACCAGRDI HDARRVAETM GFPHYVLDYE NTFREAVIDE FADAYLAGAT PVPCIRCNER
VKFKDLLQTA KDLDADCMAT GHYIQRKMGP AGPELHCAAD AARDQSYFLF STTPEQLAFL
RFPLGHLASK AETRALAARH GLPVADKPDS QDICFVPNGN YAEVIQKLRP GAADPGEIVD
LSGRVLGEHR GVIHYTIGQR RGLGIGGLGD PLYVVRLDPE RRQVIVGPKE ALSTRIVPVR
EINWLGDAPL TSRSEWQVMA KVRSTRAPRE AVIRPLSDTE AEVELIAPED GVSPGQACVF
YAPGDSRILG GGWIWRGAR
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