Gene Rsph17029_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1249 
Symbol 
ID4896186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1295992 
End bp1296699 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID640111835 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001043131 
Protein GI126462017 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATG TTTCGGGAGG CATCGCCTGC GCAGGGGCGC AGCGGGTGCC CACACGCATG 
ATCGGCGACA TTCTGATCGT CGATGACCAC CCGCTGATGT GCGACGCGCT GGCGATGACC
TTGACCCACG CCTTGGGCCT GAAACGCGTC CGCAGCGCCG CGAGCCTCGC CGCGGCGGAG
AAGATCCTGC GCGAGGGGCC CTTGCCCGAT GCCATCGTGC TCGACCTGAA CCTGCCGGAC
GTGCGCGGCA TCGAGGGCGT GATGAGCCTG CAGAAGCTCG CGCGGAGCGT GCCGCTCACG
GTGATCTCGG CCGAGGTCGA TGCCGAGATG GTGACGGCCG TCATGGCGGC CGGGGCGCAG
GGCTATGTCT CGAAAAGCCT GCCGCGGCCG CAGATGGTCG AGGCCTTCGC CCGGATGTGG
ACCGGCGAAT TCGTCACGCC CGAGGAATAC GATGCCGACG GGGCAGGCGA GGACGGCGGA
GAGCAGATGC GCGAGCTGGC CCGCAGCTTT GCAACCCTCA CGCCGCAGCA GATGAACATC
CTGCGGCTGA TCTGTCAGGG CCGGCCGAAC AAGCTCATCT CCTACGAGCT CTCGATCGCC
GAAGCGACGG TCAAGACCCA CATCGCCGCC ATCATGACGA AGATCAACGT GAGAAACCGC
ACGCAGGCGG CCCTGCTGGC CAGCAAGGCG CGGATCTTCG CGCGGTAG
 
Protein sequence
MGHVSGGIAC AGAQRVPTRM IGDILIVDDH PLMCDALAMT LTHALGLKRV RSAASLAAAE 
KILREGPLPD AIVLDLNLPD VRGIEGVMSL QKLARSVPLT VISAEVDAEM VTAVMAAGAQ
GYVSKSLPRP QMVEAFARMW TGEFVTPEEY DADGAGEDGG EQMRELARSF ATLTPQQMNI
LRLICQGRPN KLISYELSIA EATVKTHIAA IMTKINVRNR TQAALLASKA RIFAR