Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1203 |
Symbol | |
ID | 4895884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1249198 |
End bp | 1250397 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640111789 |
Product | peptidase M23B |
Protein accession | YP_001043085 |
Protein GI | 126461971 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.104562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCACC GTCCCACGCG CGCAGGCGCC CTTTGCATGA CGGCGACGCT GACGATCCTC GCCGCCTGCA GCACTTCGGA CCTAGACTGG GACCTGCGCG GTCGCCCCGG CGGGCTCAGC ACGGCCGAGG CCGCGCGGGC GGTCAGCGCC CCCCGCCCCC GCGCCGACGA CCGCGGGATC ATCTCCTATC CGACCTATCA GGTGGCCGTT GCCCGTCAGG GCGAGACGGT CGCCTCGCTC TCGAGCCGCC TCGGGCTCGA TGCCACGCAG GTCGCGAGCT ACAACGCCCT CTCGCCGCAG AACCCTCTGC GCGCCGGAGA AGTGGTCGTG CTGCCGCAGC GCGTGGCGGC GGCTCCCGCC ATGACCCCGG CGCCCGTCAT GACGGCGCCC GGCGCGGCGA GCCCCGGCGG CATCGACGTG ACCGCCATCG CCACGAGCGC CCTCGACCGG GCAGGCCCTG CCCCGGCGCC GGTGGCCGCC GCTCCCGCTG CGGCCCCCGC GCAGTCTGCC GCGACCGAGC CGGCCCGCCA CCGCGTGTCG CGGGGAGAGA CCGCCTATTC GATCGCGCGC AGCTACAATG TCTCGCCCAA GGCGCTGGCG GACTGGAACG GGCTCGGGCC GGATCTTGCG ATCCGCGAGG GCCAGTATCT GATGATCCCG ACCGCCTCTG CGCCCCCGCC CACGGTGCCC GCCAACGTGA CCGCGGTCAC GGTGCCCGGG GCAGGCTCGC CGACGCCCAC CCCGCCCTCG GCGGCCAAGC CGCTGCCCGC CGAGTCGACC ACGCCCGCCT CGAAACCCTC AGGCCAGCCC GCCTCACCCG ACATGGGCGC ACAGCGCACG CAGGCCTCGG CCTCGCGGCT GGGATTCCCG GTGCAGGGCA AGATCATCCG CGGCTATGTG AAGAAGAAGA ACGACGGCAT CGACATCTCG GCGGCCGTGG GCACGCCGGT GGCGGCGGCC GCGGACGGGA CGGTGGCGGC CATCACGCAG GACACCGATC AGGTGCCGAT CCTCGTGATC CGGCACCCCG ACAACCTGCT GACGGTCTAT GCCAATATCG ACGGCATCAA GGTCACCAAG GGTGCCAGCG TGAAGCGCGG ACAGCCCATC GCCGTGGTGC GCGCGGCCGA CCCGCCCTTC GTCCATTTCG AGGTCCGCAA GGGGTTCGAG AGCGTGGATC CGATGCCCTA CCTCCAGTAG
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Protein sequence | MFHRPTRAGA LCMTATLTIL AACSTSDLDW DLRGRPGGLS TAEAARAVSA PRPRADDRGI ISYPTYQVAV ARQGETVASL SSRLGLDATQ VASYNALSPQ NPLRAGEVVV LPQRVAAAPA MTPAPVMTAP GAASPGGIDV TAIATSALDR AGPAPAPVAA APAAAPAQSA ATEPARHRVS RGETAYSIAR SYNVSPKALA DWNGLGPDLA IREGQYLMIP TASAPPPTVP ANVTAVTVPG AGSPTPTPPS AAKPLPAEST TPASKPSGQP ASPDMGAQRT QASASRLGFP VQGKIIRGYV KKKNDGIDIS AAVGTPVAAA ADGTVAAITQ DTDQVPILVI RHPDNLLTVY ANIDGIKVTK GASVKRGQPI AVVRAADPPF VHFEVRKGFE SVDPMPYLQ
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