Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1140 |
Symbol | |
ID | 4895384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1180737 |
End bp | 1181387 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640111726 |
Product | putative phage tail minor protein |
Protein accession | YP_001043022 |
Protein GI | 126461908 |
COG category | [S] Function unknown |
COG ID | [COG5281] Phage-related minor tail protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.594391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA TCGAGTCTCT GGAAGAGCAG GTGGCGGCGC TCGAGAGCAC GCTTGGCAGT GCGGCCGGGA TGACGGCGAG CTTCGAAAAC GAACTGACGC GGATGCGGGA CGCAATGGTC TTCACGAACC GCGAGGTGGA TCGACTGTCG AGCGGCATGG GGACGGGCCT CAGGCGCGCC TTCGACGGGG TGCTGTTCGA CGGCATGAAG CTCTCGGACG CGATGCAGGG TCTCGCGCAA TCGATCTCCC GCACCGTCTA TTCGGTGGCG ATGAAGCCGG TGCAGGATGC GGTGTCGGGC TTTCTGGCCG ATGGCCTGAA CTCGATCCTC GGCGGGCTGA TGCCCTTCGC GAAGGGGGGC GCCTTCTCGC AGGGAAGGGT CATGCCTTTC GCGCGTGGCG GTGTGGTGGC AGGGGCGACG CCTTTTGCCA TGCGGGGGGC CACCGGGCTG ATGGGCGAGG CGGGCCCCGA AGCGATCCTG CCGCTCGCCC GCGGGGCAGA CGGGAGGCTC GGCGTGCAGG CGGGCGGCGG CCGCGCGGTG CAGGTGGTGA TGAACGTGGC CACGCCCGAT GTGCAGGGCT TCGAGCGCAG CCGGGGCCAG ATCGCGGCGC AGGTGAGCCG GATGCTCGCG CGCGGCCAGC GCAACGGGTA G
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Protein sequence | MADIESLEEQ VAALESTLGS AAGMTASFEN ELTRMRDAMV FTNREVDRLS SGMGTGLRRA FDGVLFDGMK LSDAMQGLAQ SISRTVYSVA MKPVQDAVSG FLADGLNSIL GGLMPFAKGG AFSQGRVMPF ARGGVVAGAT PFAMRGATGL MGEAGPEAIL PLARGADGRL GVQAGGGRAV QVVMNVATPD VQGFERSRGQ IAAQVSRMLA RGQRNG
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