Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1022 |
Symbol | |
ID | 4895446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1054911 |
End bp | 1055426 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640111608 |
Product | hypothetical protein |
Protein accession | YP_001042905 |
Protein GI | 126461791 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00948106 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGTC GCAGCGCGTC AGCATCAGCA ACCGGCCTGA GCGCTCTCGC GCTCGTGCTG GCGCTTCTGC CGGGTGCCTC CCGCGCGGAC TGTCGCCCGG ATGCGGTCGA GTTGCGCACC GAGGCCGGGT CCACGATGCG ATTCTCGGTG GAAATCGCCG ATACGCCGGC CGAGCGGTCG CGCGGGCTGA TGCACCGCGA GAGTCTGCCG CGCTCGTCGG GGATGCTGTT CCTGTTCGAC GCGCCGCACC GGGCGAGCTT CTGGATGCGC AACACGCTCA TTCCGCTCGA CATGATCTTC GCCGGGCCCG ACGGCACGGT GAAGGTCGTC CATTCCAATG CGGTGCCCGA GGATCTCACG CCCATCTCGG GCGGGGAGGG GATCCAGAGC GTGCTCGAGA TCAACGGCGG CCTCGCCCGT GCTCTCGGCA TCGGCCCCGG CACCGTCCTG CGGCATCCGG GCCTCGACCA GTCCCTCGCC GCCTGGCCCT GCGAAGAGGC GCCGGCGAAG CGCTGA
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Protein sequence | MGSRSASASA TGLSALALVL ALLPGASRAD CRPDAVELRT EAGSTMRFSV EIADTPAERS RGLMHRESLP RSSGMLFLFD APHRASFWMR NTLIPLDMIF AGPDGTVKVV HSNAVPEDLT PISGGEGIQS VLEINGGLAR ALGIGPGTVL RHPGLDQSLA AWPCEEAPAK R
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