Gene Rsph17029_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0942 
Symbol 
ID4897729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp969644 
End bp970336 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID640111527 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001042825 
Protein GI126461711 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0652855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.381593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CCTGGCTCGG CCATTCCGGC TTCCGCATCG CCATCGAGCA GGCCGTGCTG 
CTCGTCGACC CCTGGCTCAC CGGCAACCCG CTCTTCCCCG CCGACCGGCG CGAGGAGGCG
CTGGCGGGCG CCACCCATAT CCTCATCACC CACGGGCATG GCGACCATAC CGGCGACACG
GTGGCCATCG CGAAGGAACG GGGCCTTCCG GTGGTCGGCA TCTACGATCT CGTGACCTGG
CTGCAGGAGA AGGAGGGGAT CGACGGGATC GGCTTCAACA AGGGCGGCAC GGTGACGCTG
GGCGGGGCGC GGGTCACCAT GGTGCAGGCC ACCCATTCCT CCTCCATGTC GGGCGAGGCG
GGCCCGATCT ATACCGGCAC CGAATCGGGC TACATGATCG CGGGCGAGGG CCATGTGATC
TACCTGTCGG GCGATACCGA CATCATGGCC GACATGGGCT GGATGGGCGA ATACCATCGA
CCCGACGTGG GCATCCTCTC CGCGGGCGGT CATTTCACCA TGGACATGAA GCGGGCGGCC
TTCGCGGCGC GCAGATATTT CGACTTCCGT ACCGTGATCC CCTGCCATTA CCGCACCTTC
CCGCTGCTCG AACAGTCGGC CGAGGCGCTG AAGGAGGGCC TGCCCGGCGT CGAGGTGATC
GAGCCGCAGG TGCTCGTCCC GATCGAGATC TGA
 
Protein sequence
MKITWLGHSG FRIAIEQAVL LVDPWLTGNP LFPADRREEA LAGATHILIT HGHGDHTGDT 
VAIAKERGLP VVGIYDLVTW LQEKEGIDGI GFNKGGTVTL GGARVTMVQA THSSSMSGEA
GPIYTGTESG YMIAGEGHVI YLSGDTDIMA DMGWMGEYHR PDVGILSAGG HFTMDMKRAA
FAARRYFDFR TVIPCHYRTF PLLEQSAEAL KEGLPGVEVI EPQVLVPIEI