| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0856 |
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| Symbol | |
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| ID | 4897811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 873871 |
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| End bp | 875517 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640111441 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001042739 |
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| Protein GI | 126461625 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT ACATCATCGT CGGCGCCGGC TCGGCCGGCT GTGCCATGGC CTATCGCCTC
GGCGAGGCGG GCCGCTCGGT GCTGGTCGTC GAGCATGGCG GCACGGATGC CGGGCCCTTC
ATCCAGATGC CCGCGGCGCT CTCCTATCCG ATGAACATGG GGATCTACGA CTGGGGCCTG
AAGACCGAGC CCGAGCCGCA TCTGGACGGG CGCGTGCTCG CCACGCCGCG CGGCAAGGTG
ATCGGCGGCT CCTCCTCGAT CAACGGCATG GTCTATGTCC GCGGTCACGC GCGCGATTTC
GACCATTGGG CCGAGAGCGG GGCCACCGGC TGGGGCTTTG CCGATGTGCT GCCCTATTTC
AAGCGGATGG AGAACTGGCA CGTCCCCGGC GATGTCGAGT GGCGCGGCCA TGACGGGCCG
CTGCACGTCA CGCGCGGCCC GCGCTCCAAT CCCCTGTTCA ACGCCTTCAT CGAGGCGGGG
CGGCAGGCGG GCTATCCGGT GACCGACGAT TACAACGGCG CGGCGCAGGA GGGCTTCGGC
CCGATGGAGG CCACGATCTG GCAGGGCCGG CGCTGGTCGG CCGCCAATGC CTATCTCAGG
CCCGCGATGA AGCGGTTCGG GGTCCAGCTC ACCCGTGCCC TCGCGCTGAA GGTGGTGATC
GAGGAGGGCC GTGCCGTCGG CGTCGAGGTG CAGCGCCGCG GCGGCCGCGA GGTGATCCGG
GCCGGCCGCG AGGTGATCCT CGCCGCCTCC TCGCTCAACA CGCCGAAGCT TCTGATGCTG
TCGGGCATCG GGTCCGCCGC GCATCTGGCC GAGCACGGGA TCCCGGTCGT GGCCGACCGG
CCGGGCGTGG GCCGGAACCT CCAGGACCAT CTGGAGGTCT ACATGCAGTT CGCGAGCCTC
CAGCCGGTCA CGCTCTTCAA GCACTGGAAC CTGCGCGGCA AGGTCAGCAT CGGCGCGCAG
TGGCTGTTTA CCGGGCGCGG GCTCGGGGCC TCGAACCAGT TCGAGGCCTG CGCCTTCATC
CGCTCGAAGC CGGGCGTGGA TTATCCCGAC ATCCAGTATC ACTTCCTGCC CATTGCCGTG
CGCTACGACG GCAAGGCCGC CGCCGAGGGC CACGGCTTCC AGGTGCATGT GGGGCCGATG
CGCTCGCCCT CGCGCGGGTC GGTGACGCTG CGCTCGGCCG ATCCCGAGGC GCCGCCGGTG
ATCCGCTTCA ACTACATGTC GACCGAAGAG GATTGGCAGG ACTTCCGCCG CTGCGTCCGC
CTCACGCGCG AGATCTTCGG GCAGGAGGCC TTCAAGCCCT TCGTCCGGCA CGAGATCCAG
CCGGGGGCGG CCTGCGCTTC GGACGCGGAG ATCGACGCCT TCATCCGCGC GCATGTCGAG
AGCGCCTACC ACCCCTGCGG GACGGCGCGG ATCGGGCGGG CGGACGATCC GATGGCGGTC
GTCGATCCCG AGTGCCGGGT GATCGGGGTC GAGGGGCTGC GCGTGGCCGA CAGTTCGATC
TTCCCGCGGG TGACGAACGG CAACCTCAAC GCGCCCTCGA TCATGGTGGG CGAGAAGGCG
TCCGACCATA TCCTCGGCCG GACCCCGCTC GCGCCGCTGA ACCTCGAGCC GGTGACGAAC
CCGAACTGGC GCACGGCCCA ACGCTGA
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| Protein sequence | MFDYIIVGAG SAGCAMAYRL GEAGRSVLVV EHGGTDAGPF IQMPAALSYP MNMGIYDWGL
KTEPEPHLDG RVLATPRGKV IGGSSSINGM VYVRGHARDF DHWAESGATG WGFADVLPYF
KRMENWHVPG DVEWRGHDGP LHVTRGPRSN PLFNAFIEAG RQAGYPVTDD YNGAAQEGFG
PMEATIWQGR RWSAANAYLR PAMKRFGVQL TRALALKVVI EEGRAVGVEV QRRGGREVIR
AGREVILAAS SLNTPKLLML SGIGSAAHLA EHGIPVVADR PGVGRNLQDH LEVYMQFASL
QPVTLFKHWN LRGKVSIGAQ WLFTGRGLGA SNQFEACAFI RSKPGVDYPD IQYHFLPIAV
RYDGKAAAEG HGFQVHVGPM RSPSRGSVTL RSADPEAPPV IRFNYMSTEE DWQDFRRCVR
LTREIFGQEA FKPFVRHEIQ PGAACASDAE IDAFIRAHVE SAYHPCGTAR IGRADDPMAV
VDPECRVIGV EGLRVADSSI FPRVTNGNLN APSIMVGEKA SDHILGRTPL APLNLEPVTN
PNWRTAQR
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