| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0765 |
|---|
| Symbol | |
|---|
| ID | 4897986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 767876 |
|---|
| End bp | 771340 |
|---|
| Gene Length | 3465 bp |
|---|
| Protein Length | 1154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640111349 |
|---|
| Product | pyruvate carboxylase |
|---|
| Protein accession | YP_001042648 |
|---|
| Protein GI | 126461534 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1038] Pyruvate carboxylase |
|---|
| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.531635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGT TCCGAAAGAT CCTCATCGCC AACCGTGGTG AGATCGCCAT CCGGGTGATG
CGGGCGGCAA ACGAGATGGG CAAGAAGACG GTCGCCGTCT ATGCCGAGGA AGACAAGCTC
TCGCTCCACC GCTTCAAGGC GGACGAGGCC TACCGGATCG GCGAGGGCCT CTCGCCCGTG
GGCGCCTATC TCTCGATCCC CGAGATCATC CGCGTGGCGC AGATGTCGGG CGCCGATGCG
ATCCACCCGG GCTACGGGCT TCTGTCGGAG AACCCCGATT TCGTCGAGGC CTGTGACGCG
GCGGGCATCG CCTTCATCGG CCCGAAGGCC GAGACGATGC GCGCGCTCGG CGACAAGGCT
TCGGCGCGCC GCGTGGCCAT GGCCGCGGGC GTGCCGGTGA TCCCGGCGAC CGAGGTGCTG
GGCGACGACA TGGAGGAGAT CAAGCGGCAG GCGGCCGAGA TCGGCTATCC GCTGATGCTC
AAGGCCTCGT GGGGCGGCGG CGGGCGCGGC ATGCGGCCCA TCACCTCCGA GGCCGAGCTG
GCCGACAAGG TGCGCGAGGG CCGACGCGAG GCCGAGGCCG CCTTCGGCAA CGGCGAGGGC
TATCTCGAGA AGATGATCCA GCGCGCGCGC CACGTCGAGG TGCAGATCCT CGGCGACAAA
TACGGCGCGA TCTACCATCT CTACGAGCGC GACTGCACCG TGCAGCGGCG CAACCAGAAG
GTCGTCGAAC GCGCGCCCGC GCCCTATCTC ACCGAGGAGC AGCGGACAGA GATCTGCGAG
CTCGGCCGCC GGATCTGCGC CCATGTGAAT TACGAATGCG CGGGCACGGT CGAGTTCCTG
ATGGACATGG ACTCGGAGAA ATTCTATTTC ATCGAGGTCA ATCCGCGGGT TCAGGTCGAG
CATACCGTCA CCGAGGAAGT GACCGGCATC GACATCGTGC AGTCGCAGAT CCGCATCGCG
GAAGGGGCGA CGCTGGCCGA GGCAACCGGA TGCCCGAGCC AGGACGACAT CAAGCTCTCG
GGCCATGCGC TGCAGTGCCG CGTCACGACC GAGGATCCGC AGAACAATTT CATTCCCGAC
TACGGCCGGC TCACCGCCTA TCGCTCGGCC ACGGGCATGG GCATCCGGCT GGACGGCGGC
ACCGCCTATG CCGGGGGCGT CATCACCCGC TATTACGATT CGCTCCTCGT GAAGGTGACG
GCCTGGGCCC CCACGCCCGA AAAGGCCATC GCGCGGATGG ACCGGGCGCT GCGCGAGTTC
CGCATCCGGG GCGTGGCCAC CAACATCGCC TTCGTCGAGA ACCTGCTGAA GCACCCGAGC
TTCCTAGACT ATTCCTATAC GACGAAATTC ATCGACACGA CGCCCGACCT CTTCAACTTC
AAGCCGCGCC GTGACCGGGC GACGAAGATC CTGACCTACA TCGCCGACAT CACCGTGAAC
GGGCACCCCG AGACGGCCGG CCGAGCCCGC CCCTCGACGG AGTTGAAGGA TCCGAAGGCA
CCCGAGCCCA AGGGCGCGCC GCAGCCCGGC ACGCGGACCC TCCTCGAGGA GAAGGGTCCG
CAGGCGGTGG CCGACTGGAT GGCTGCGCAG ACCCGCGTGC TGATGACCGA CACGACGATG
CGCGACGGCC ACCAGAGCCT GCTCGCCACC CGGATGCGTT CGATCGACAT GATCAAGGTC
ACGCCCGCCT ATGCGGCGAA CCTCGGCGGC CTCTTCTCGG TGGAATGCTG GGGCGGCGCC
ACCTTCGATG TGGCGTACCG CTTCCTGCAG GAATGTCCCT GGCAGCGGCT GCGCGACATC
CGGGCTCGGC TGCCCAACGT CATGACGCAG ATGCTGCTGC GCGCCTCGAA CGGGGTCGGC
TACACGAATT ACCCCGACAA TGTGGTGCAG GAATTCGTCC GGCAGGCGGC CGAAACCGGC
GTCGACGTGT TCCGCGTGTT CGACTCGCTC AACTGGGTCG AGAACATGCG CGTGGCAATG
GATGCGGTGA TCGAGGCCAA CAAGGTCTGC GAGGGCACGA TCTGCTACAC GGGCGACCTG
CTCGATCCCG ACCGCTCCAA ATACGATCTG AACTACTATG TCGGCATGGG CCGCGCGCTG
CGCGATGCGG GCGCGCATGT GCTGGGTCTG AAGGACATGG CCGGGCTTCT GAAGCCTGCC
GCCGCCCGCG TGCTGGTGAA GGCGCTGAAG GAGGAGGTGG GCCTGCCGAT CCACTTCCAC
ACCCACGACA CGAGCGGAAT TGCGGGCGCG ACCGTGCTCG CCGCCTGCGA TGCGGGGGTG
GATGCGGTCG ATGCGGCCAT GGACGCCTTC TCGGGCGGCA CCTCGCAGCC CTGCCTCGGC
TCGATCGTCG AGGCGCTGAA GCACACCGAC CGCGACACGG GCCTCGACAT CGCGGCGATC
CGCGAGATCT CGGACTACTG GGGCCATGTG CGCCAGCAGT ATTCGGCCTT CGAATCGGGC
CTGCCCTCGC CCGCCTCCGA GGTCTATCTG CACGAGATGC CCGGCGGCCA GTTCACCAAC
CTCAAGGCGC AGGCGCGCTC CATGGGGCTC GAGGAACGCT GGTCCGAGGT GGCGCAGGCC
TATGCCGACG CGAACCGGAT GTTCGGCGAC ATCGTGAAGG TCACGCCCTC GTCGAAGGTG
GTGGGCGACA TGGCGCTGAT GATGGTGGCG CAGGGGCTGA CGCGGGAAGA GGTCGAGGAT
CCCGAGGTCG AGGTGAGCTT CCCGGACTCG GTCGTGGACA TGCTCAAGGG CAATCTCGGC
CAGCCCCACG GCGGCTGGCC CGAGCCGATC CTGAAGAAGG TGCTGAAGGG CGAGGCCCCG
TCGACCGAGC GGCCGGGCGC GCATCTGCCG CCCGTCGACA TCGCGGCCGC GCGCGAAAAG
CTCCTGTCGG AGATCAAGCA GGGCGACGAC GATCCGCTCG ACACGGCCGT CGATGCCGAG
GATCTGAACG GCTACCTCAT GTATCCCAAG GTCTTCACCG ACTACCGCGC CCGCCACAGG
ATCTACGGGC CGGTGCGGAC GCTGCCGACC CGGACCTTCT TCTACGGGAT GGAGCCGGGC
GAGGAGATCT CGGCCGAAAT CGACCCCGGC AAGACGCTCG AGATCCGGCT GTCCGCCGTG
GGCGAGACGT CGGACGACGG CGATGCCAAG GTGTTCTTCG AGCTGAACGG CCAGCCGCGG
GTGATCCGCG TGGCCAACCG GGCGGTGAAG GCCAAGACCG CGACCCGGCC CAAGGCGCAG
GACGGCAATC CGGCCCATGT CGGCGCCCCG ATGCCGGGTT CGGTCGCCTC GGTCGCGGTC
TCGACGGGGC AGAAGGTGAA GCCGGGCGAT CTCCTCGTCA CCATCGAGGC GATGAAGATG
GAGACCGGGC TCCATGCCGA CCGTGCGGCC ACCGTGAAGG CTGTCCATGT CGGGCCCGGC
GCGCAGATCG AGGCGAAGGA CCTGCTGGTC GAACTCGAGG ACTGA
|
|---|
| Protein sequence | MAEFRKILIA NRGEIAIRVM RAANEMGKKT VAVYAEEDKL SLHRFKADEA YRIGEGLSPV
GAYLSIPEII RVAQMSGADA IHPGYGLLSE NPDFVEACDA AGIAFIGPKA ETMRALGDKA
SARRVAMAAG VPVIPATEVL GDDMEEIKRQ AAEIGYPLML KASWGGGGRG MRPITSEAEL
ADKVREGRRE AEAAFGNGEG YLEKMIQRAR HVEVQILGDK YGAIYHLYER DCTVQRRNQK
VVERAPAPYL TEEQRTEICE LGRRICAHVN YECAGTVEFL MDMDSEKFYF IEVNPRVQVE
HTVTEEVTGI DIVQSQIRIA EGATLAEATG CPSQDDIKLS GHALQCRVTT EDPQNNFIPD
YGRLTAYRSA TGMGIRLDGG TAYAGGVITR YYDSLLVKVT AWAPTPEKAI ARMDRALREF
RIRGVATNIA FVENLLKHPS FLDYSYTTKF IDTTPDLFNF KPRRDRATKI LTYIADITVN
GHPETAGRAR PSTELKDPKA PEPKGAPQPG TRTLLEEKGP QAVADWMAAQ TRVLMTDTTM
RDGHQSLLAT RMRSIDMIKV TPAYAANLGG LFSVECWGGA TFDVAYRFLQ ECPWQRLRDI
RARLPNVMTQ MLLRASNGVG YTNYPDNVVQ EFVRQAAETG VDVFRVFDSL NWVENMRVAM
DAVIEANKVC EGTICYTGDL LDPDRSKYDL NYYVGMGRAL RDAGAHVLGL KDMAGLLKPA
AARVLVKALK EEVGLPIHFH THDTSGIAGA TVLAACDAGV DAVDAAMDAF SGGTSQPCLG
SIVEALKHTD RDTGLDIAAI REISDYWGHV RQQYSAFESG LPSPASEVYL HEMPGGQFTN
LKAQARSMGL EERWSEVAQA YADANRMFGD IVKVTPSSKV VGDMALMMVA QGLTREEVED
PEVEVSFPDS VVDMLKGNLG QPHGGWPEPI LKKVLKGEAP STERPGAHLP PVDIAAAREK
LLSEIKQGDD DPLDTAVDAE DLNGYLMYPK VFTDYRARHR IYGPVRTLPT RTFFYGMEPG
EEISAEIDPG KTLEIRLSAV GETSDDGDAK VFFELNGQPR VIRVANRAVK AKTATRPKAQ
DGNPAHVGAP MPGSVASVAV STGQKVKPGD LLVTIEAMKM ETGLHADRAA TVKAVHVGPG
AQIEAKDLLV ELED
|
|---|
| |