Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0563 |
Symbol | |
ID | 4895208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 588712 |
End bp | 589341 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111148 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_001042451 |
Protein GI | 126461337 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGGG ATCGCAACCA GATGGCGGCA CGCGCCGCGC AGGAGCTTCA GGACGGCTGG TATGTCAACC TCGGGATCGG CATCCCGACG CTGGTGGCCA ACTACATCCC CGAAGGGATC GAGGTGACGC TGCAATCCGA GAACGGGATG CTCGGCATGG GCCCCTTCCC CTTCGAGGGC GAGGAGGATG CGGACCTCAT CAACGCGGGC AAGCAGACGA TCACCGAACT GCCCAAGACC GCCTATTTCG ACAGTGCCCA GAGCTTCGCC ATGATCCGCG GCGGCAAGAT CGCCATGGCG ATCCTCGGCG CGATGGAGGT GGCCGAGAAC GGCGATCTGG CGAACTGGAT GATCCCGGGC AAGCTCGTGA AGGGGATGGG CGGGGCGATG GACCTCGTGG CGGGCGTGCA GCGCGTGGTG GTGGTGATGG ACCACACCTC GAAGCACGGC GAGTCGAAGG TGCTGAAGCA CTGCACCCTG CCGCTGACCG GTCAGGGCGT GGTCAACCGC ATCGTGACCA ACCTCGGCGT GCTGGATGTC GTTTCGGGTG GGCTCCGGAT CGTGGAATGC GCCGAGGGCG TGACCGAGGC CGAGCTGCGG GCCGCGACCG AGGCCACGAT CGTTGACTGA
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Protein sequence | MAWDRNQMAA RAAQELQDGW YVNLGIGIPT LVANYIPEGI EVTLQSENGM LGMGPFPFEG EEDADLINAG KQTITELPKT AYFDSAQSFA MIRGGKIAMA ILGAMEVAEN GDLANWMIPG KLVKGMGGAM DLVAGVQRVV VVMDHTSKHG ESKVLKHCTL PLTGQGVVNR IVTNLGVLDV VSGGLRIVEC AEGVTEAELR AATEATIVD
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