Gene Rsph17029_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0563 
Symbol 
ID4895208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp588712 
End bp589341 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID640111148 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_001042451 
Protein GI126461337 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGG ATCGCAACCA GATGGCGGCA CGCGCCGCGC AGGAGCTTCA GGACGGCTGG 
TATGTCAACC TCGGGATCGG CATCCCGACG CTGGTGGCCA ACTACATCCC CGAAGGGATC
GAGGTGACGC TGCAATCCGA GAACGGGATG CTCGGCATGG GCCCCTTCCC CTTCGAGGGC
GAGGAGGATG CGGACCTCAT CAACGCGGGC AAGCAGACGA TCACCGAACT GCCCAAGACC
GCCTATTTCG ACAGTGCCCA GAGCTTCGCC ATGATCCGCG GCGGCAAGAT CGCCATGGCG
ATCCTCGGCG CGATGGAGGT GGCCGAGAAC GGCGATCTGG CGAACTGGAT GATCCCGGGC
AAGCTCGTGA AGGGGATGGG CGGGGCGATG GACCTCGTGG CGGGCGTGCA GCGCGTGGTG
GTGGTGATGG ACCACACCTC GAAGCACGGC GAGTCGAAGG TGCTGAAGCA CTGCACCCTG
CCGCTGACCG GTCAGGGCGT GGTCAACCGC ATCGTGACCA ACCTCGGCGT GCTGGATGTC
GTTTCGGGTG GGCTCCGGAT CGTGGAATGC GCCGAGGGCG TGACCGAGGC CGAGCTGCGG
GCCGCGACCG AGGCCACGAT CGTTGACTGA
 
Protein sequence
MAWDRNQMAA RAAQELQDGW YVNLGIGIPT LVANYIPEGI EVTLQSENGM LGMGPFPFEG 
EEDADLINAG KQTITELPKT AYFDSAQSFA MIRGGKIAMA ILGAMEVAEN GDLANWMIPG
KLVKGMGGAM DLVAGVQRVV VVMDHTSKHG ESKVLKHCTL PLTGQGVVNR IVTNLGVLDV
VSGGLRIVEC AEGVTEAELR AATEATIVD