Gene Rsph17029_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0509 
Symbol 
ID4895423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp536349 
End bp537071 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID640111093 
Productcell wall hydrolase, SleB 
Protein accessionYP_001042397 
Protein GI126461283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGC TTGATATCTG GATGCGCAGT GCCGCGGCAC TGATGCTCCT GAGCGGAGCG 
GCCTTCGCCG ATGTGACGGT GAGCCAGTCC AACGATCCGT CCGTCAGTCT GGGCGGGCAG
CTTTCGGCCC TTCTGGGCGC CGAGCGGAAC GCCCTCGGAA CTCTGCCGGC CCAGCGGCTC
GAGCAGGTGG CGGCCGCCGT GGCCCGCCCC GAGGCCAAGC CCGAGGCGCC GGTCAGGGCG
GTGGCGACCA AGGGCAACCG CGGCGCCAAG GCCGCGGACG ACGCTCCGGC GCCGCGCTAC
GACGAGGCCT GGCTCGCCTC GCAGCCGGCG ACCGCGAAGG ACTCGGACGA GTGGAAGTGT
CTGGCCACGG CGCTCTATTT CGAGGCGCGC GGCGAGTCGA TCCAGGGCCA GTTCGCGGTG
GCCGAGGTCA TCATGAACCG CGTCGACCGC CCCGGCTATC CCGGGTCCAT CTGCGGCGTG
GTCCGGCAGG GCGGGCAGTT CTCCTTCATG TTCGACGGCA AACCCGAAAC GATCCGCGAG
AAGGCGGCCT TCCAGCGTGC GGGCAAGATC GCGGCGCTGA TGCTGGCGGG CGCGCCGCGC
CAGCTCACCC AGGGCGCCAC CCACTTCCAC ACCCGCGCCG TCCGCCCCGG ATGGGCGCAC
CGCTTCCCGC GCACGGCGGC CATCGGCGCG CATCTGTTCT ACCGCCAGCC CGGCGGCTCC
TGA
 
Protein sequence
MRLLDIWMRS AAALMLLSGA AFADVTVSQS NDPSVSLGGQ LSALLGAERN ALGTLPAQRL 
EQVAAAVARP EAKPEAPVRA VATKGNRGAK AADDAPAPRY DEAWLASQPA TAKDSDEWKC
LATALYFEAR GESIQGQFAV AEVIMNRVDR PGYPGSICGV VRQGGQFSFM FDGKPETIRE
KAAFQRAGKI AALMLAGAPR QLTQGATHFH TRAVRPGWAH RFPRTAAIGA HLFYRQPGGS