Gene Rsph17029_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0258 
Symbol 
ID4898050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp281061 
End bp281546 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID640110841 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001042149 
Protein GI126461035 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGA TCTTTCTGGC CGCCTCCGCG TTCGGAGCCC TGAGCGTGGC CATCCTCGTG 
GTGATGACCG CCGCAGCGGT GGTCGCGCGC TACATCCTGG GCATGCCCAT CGCCTGGACC
GAGGAGGTCT CGGGCCTCCT GATGATCTGG ATCGTGATGG TCGGCGCCAT CGCCTGCGAG
GCGAACCGCC AGCATCTGAC CATCGACCTG ATCGAAGGCG TGCTCTCGCC GCGGCTGAAC
CGCGCGCTCT CGGCCGTCGT GGGTCTCGCC TCGATCGGGC TTCTGATCTT CATGTCCTGG
CAGGCCTGGG CGCTCGGTCA GACCACCGCC TTCAAGAAGA CGCAGATCCT CGGGGTCTCG
TGGTTCTGGC TCGATCTCGC CGTGGTCGTG GGGGCTGCGG GCACCGCAAT CGTGATGGCC
TGGCGGCTGA TCCGGCCCGA TGCCGAAGCC CGCTCCGACG CCGCCGCCGA CCGCCTCGAG
CACTGA
 
Protein sequence
MRLIFLAASA FGALSVAILV VMTAAAVVAR YILGMPIAWT EEVSGLLMIW IVMVGAIACE 
ANRQHLTIDL IEGVLSPRLN RALSAVVGLA SIGLLIFMSW QAWALGQTTA FKKTQILGVS
WFWLDLAVVV GAAGTAIVMA WRLIRPDAEA RSDAAADRLE H