| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0249 |
|---|
| Symbol | |
|---|
| ID | 4895561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 271216 |
|---|
| End bp | 272412 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640110832 |
|---|
| Product | phosphopentomutase |
|---|
| Protein accession | YP_001042140 |
|---|
| Protein GI | 126461026 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1015] Phosphopentomutase |
|---|
| TIGRFAM ID | [TIGR01696] phosphopentomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGG CCTTTCTCAT CGTGATGGAT TCGGTGGGAT GCGGCGGTGC GCCGGATGCG
GCGGCCTTTG GTGACGCGGG CTCGAACACA CTCGGCCATA TCGCCGAGGC TTGCGCAGCG
GGCCGCGCCG AGGAGGGGCG GAGCGGCCCG CTGCGGCTGC CGGTCCTCGA CGCGCTGGGT
CTCGGGCGCG CCATCGAGCT GGCCTCGGGC CTCACCGCGC CGGGGCTCGG GGCAGAGCCC
TCGGGCCGCT GGGGCGCCGC GACCGAGGTC TCGAAGGGCA AGGACACGCC CTCGGGCCAC
TGGGAGCTGG CGGGCGTGCC GGTGCCGTGG GACTGGCACT ATTTCCCCGA CCGCTGCCCC
GCCTTTCCCG ACGATCTCAC CGCCGAGATC TGCAGGCGCG CGGGCACCGA AGGCATCCTC
GGCAACCGGC ATGCCTCGGG CACGGCAGTG ATCGAGGAAC TGGGCGCCGA GCATCTGCGC
ACCGGCTGGC CCATCTGCTA CACCTCGGCC GACAGCGTGC TTCAGATTGC GGCCCATGAG
GAGGCCTTCG GGCTCGACCG GCTGCTGGCA CTCTGCGCGG GGCTGGCGCC GACGCTGCAT
GCGATGCGCG TGGGCCGGGT GATCGCGCGC CCCTTCACGG GCGCACCCGG CAGCTTCGCC
CGCACGCCCA ACCGGCGCGA CTATGCCATC GCGCCGCCCG CGCCGACGCT CCTCGACATA
GCGGCCGCGG CGGGGCGGGC CACTCATGCC ATCGGCAAGA TCGGCGACAT CTTCTCGCAT
CGCGGGATCG GGCAGCTGCA CAAGGGCCGC GACGATGCCG CGCTCTTCGA CCGGCTGGAC
GCTTTGGCCG ACACGGCCGA GGAGGGCGCG CTCACCTTCG CGAACTTCGT CGAATTCGAC
TCGCTCTACG GCCACCGCCG CGACGTATCG GGCTATGCGC GGGCGCTCGA ATGGTTCGAC
GGCCGGGCGG GAGCGTTTCT CGCGCGGCTC CGGCCGGGCG ACATGGCGCT GTTCACCGCC
GACCATGGCA ACGATCCCAC CTTCCGCGGC ACCGAGCATA CGCGCGAACG GGTGCCGGTG
CTGATCGCGG GCACCGGGGC GGGGCCGCTC GGCCTCTGCG CCTATGCCGA TGTGGCGGCG
ACCGTGGCCG CGCATCTGGG CCTCTCCAAC CCCGGGCCGG GGAGGGCGCT CGCATGA
|
|---|
| Protein sequence | MPRAFLIVMD SVGCGGAPDA AAFGDAGSNT LGHIAEACAA GRAEEGRSGP LRLPVLDALG
LGRAIELASG LTAPGLGAEP SGRWGAATEV SKGKDTPSGH WELAGVPVPW DWHYFPDRCP
AFPDDLTAEI CRRAGTEGIL GNRHASGTAV IEELGAEHLR TGWPICYTSA DSVLQIAAHE
EAFGLDRLLA LCAGLAPTLH AMRVGRVIAR PFTGAPGSFA RTPNRRDYAI APPAPTLLDI
AAAAGRATHA IGKIGDIFSH RGIGQLHKGR DDAALFDRLD ALADTAEEGA LTFANFVEFD
SLYGHRRDVS GYARALEWFD GRAGAFLARL RPGDMALFTA DHGNDPTFRG TEHTRERVPV
LIAGTGAGPL GLCAYADVAA TVAAHLGLSN PGPGRALA
|
|---|
| |