Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0213 |
Symbol | |
ID | 4895482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 232200 |
End bp | 232886 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640110796 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001042104 |
Protein GI | 126460990 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.508726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC ATGTCTTTGC CCCGCCCGCC GCGCCCTCCC TGCCCGTTGC GGAGAGCCAG ACGCTCTTCC CGGTGCGGCG CGTCTACTGC ATCGGCCGGA ACTATGCCGC CCATGCGGTC GAGATGGGCG GCGATCCCGA CCGCGAGCCG CCGTTCTTCT TCCAGAAGAA CCCCGACAAT CTCGACCCGT CGGGCCGCTT CCCCTACCCG CCCGAAAGCT CGGACGTCCA TCACGAGGTC GAGCTCGCGG TGATGCTGGG CTCGGGCGGG ACGGATATTC CGGTCGAGGA GGCGATGGCC CATGTGTGGG GCTATGCGCT CGCCCTCGAC ATGACGCGGC GCGACCTGCA GGGCGAGGCG AAGAAGGCCG GCCGGCCGTG GGAAGTGGGC AAGGCCTTCG AACGGTCCGC CCCGGTGGGT CCGGTGCATC CCGCAGCGCG GATCGGCCAT CCCGAAGCGG GGCGGATCGA GCTCCGGGTC AATGGCGCGC TGCGGCAGGA GGGCGATCTC AACCAGATGA TCTGGAAGGT GCCGGAAATG ATCTCCGTCC TGTCGCGCCA TTTCGCGCTG GCCGCGGGCG ACGTGATCCT GACCGGCACG CCTTCCGGGG TCGGCGCGGT GCAGCGCGGA GACGTGATGG AGGCCAGCAT CGACGGTCTC GGCACGCTGC GTGTCGAGGT GGTCTGA
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Protein sequence | MSDHVFAPPA APSLPVAESQ TLFPVRRVYC IGRNYAAHAV EMGGDPDREP PFFFQKNPDN LDPSGRFPYP PESSDVHHEV ELAVMLGSGG TDIPVEEAMA HVWGYALALD MTRRDLQGEA KKAGRPWEVG KAFERSAPVG PVHPAARIGH PEAGRIELRV NGALRQEGDL NQMIWKVPEM ISVLSRHFAL AAGDVILTGT PSGVGAVQRG DVMEASIDGL GTLRVEVV
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