Gene Rsph17029_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0213 
Symbol 
ID4895482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp232200 
End bp232886 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID640110796 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001042104 
Protein GI126460990 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.508726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC ATGTCTTTGC CCCGCCCGCC GCGCCCTCCC TGCCCGTTGC GGAGAGCCAG 
ACGCTCTTCC CGGTGCGGCG CGTCTACTGC ATCGGCCGGA ACTATGCCGC CCATGCGGTC
GAGATGGGCG GCGATCCCGA CCGCGAGCCG CCGTTCTTCT TCCAGAAGAA CCCCGACAAT
CTCGACCCGT CGGGCCGCTT CCCCTACCCG CCCGAAAGCT CGGACGTCCA TCACGAGGTC
GAGCTCGCGG TGATGCTGGG CTCGGGCGGG ACGGATATTC CGGTCGAGGA GGCGATGGCC
CATGTGTGGG GCTATGCGCT CGCCCTCGAC ATGACGCGGC GCGACCTGCA GGGCGAGGCG
AAGAAGGCCG GCCGGCCGTG GGAAGTGGGC AAGGCCTTCG AACGGTCCGC CCCGGTGGGT
CCGGTGCATC CCGCAGCGCG GATCGGCCAT CCCGAAGCGG GGCGGATCGA GCTCCGGGTC
AATGGCGCGC TGCGGCAGGA GGGCGATCTC AACCAGATGA TCTGGAAGGT GCCGGAAATG
ATCTCCGTCC TGTCGCGCCA TTTCGCGCTG GCCGCGGGCG ACGTGATCCT GACCGGCACG
CCTTCCGGGG TCGGCGCGGT GCAGCGCGGA GACGTGATGG AGGCCAGCAT CGACGGTCTC
GGCACGCTGC GTGTCGAGGT GGTCTGA
 
Protein sequence
MSDHVFAPPA APSLPVAESQ TLFPVRRVYC IGRNYAAHAV EMGGDPDREP PFFFQKNPDN 
LDPSGRFPYP PESSDVHHEV ELAVMLGSGG TDIPVEEAMA HVWGYALALD MTRRDLQGEA
KKAGRPWEVG KAFERSAPVG PVHPAARIGH PEAGRIELRV NGALRQEGDL NQMIWKVPEM
ISVLSRHFAL AAGDVILTGT PSGVGAVQRG DVMEASIDGL GTLRVEVV