| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0039 |
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| Symbol | |
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| ID | 4895905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 47701 |
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| End bp | 49311 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640110615 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001041931 |
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| Protein GI | 126460817 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACT GGTGGCGCGG GTCGGTGACC TATCAGATCT ATCCCCGCTC GTTTCAGGAT
TCCGACGGCG ACGGCGTGGG CGACCTGCGC GGCATCATCG AGCGGCTCGA CCATGTGGCC
TGGCTCGGGG CCGACGCGAT ATGGCTGTCG CCGATCTTCC CCTCGCCCAT GGAGGACATG
GGCTACGACG TGTCGGACTA CACCGCCATC CACCCGCTCT TCGGCTCGAT GGAGGATTTC
GACGCGCTGC TCGCTCGCGC GCACGAGCTC GGGCTGAAGG TCATCATCGA CCAGGTTCTC
AGCCATTCCT CCTCGGCCCA TCCGTTCTTC CGCGAAAGCC GGCGGAGCCG CGACAATCCC
AAGGCCGACT GGTATGTCTG GGCCGACGCG CAGCCCGACG GCAGCCCGCC GAACAACTGG
CTGTCGGTCT TCGGCGGCTC GGCCTGGGAA TGGGATGCGC AGCGGCGGCA GTATTACCTG
CACAACTTCC TGATCTCGCA GCCCGACTTC AACTTCCACA ATCCCGAGGT GCAGGACTGG
CTGCTCGACC AGATGCGCTT CTGGCTCGAC CGGGGCGTGG ACGGCTTCCG GCTCGACACG
GTGAACTTCT ACTTCCACGA CGCCGAGCTC AGGTCGAACC GGCCGAACCC GCAGAACGGG
CCGATCCCGC CGGTCAATGC CTACGACATG CAGGATCATG CCTTCTCGAA GTCGCGGATC
GAGAATATCG CCTTCCTCCT CAGGATGCGG AAGCTGCTCG ACGACTACCC GGACCGGGCG
ATGGTCGGCG AGGTGGCCGA CGGGCTGCGC GGCCTTGCGA TCATGGCGGA ATATACCAGC
GGGGCCGACC GGCTGCACAT GGCCTACACG TTCGAGATGC TGTCGCGCAC CTTCACCGCC
GGCCATTTCC GCAGCCGGAT CGAGGAGTTC TTCGCCACCG CGCCGCATGG CTGGCCCTGC
TGGGCCTTTT CCAACCACGA TGTGGTGCGC CATGCGACGC GCTGGGCCGG CCACGGGGCC
GAGGACGATG TGGCGCGGCT CGCGGCGGCC ATGCTCCTGT CCTTCGAGGG CTCGGTCAGT
CTCTATCAGG GCGAGGAACT GGGCCAGACA GAGACCGAGC TGCTCTATGA GGAGCTGACC
GATCCGCCGG GCCTCCGGTT CTGGCCCGAG GAGAAGGGGC GCGACGGCTG CCGCACGCCG
ATGGTCTGGG ACGACGGGCC CGCGGGCGGC TTCACCACCG GCACGCCGTG GCTGCCGGTG
AAGCCGCCGC AGCTGGCCCG CAACGTGGCG TCGCAGAAGG GCATCCCCGG CTCGGTGCTC
GAGACCTACC GGGCGCTTCT CCAGTTCCGC CGGACCCAGC CTGCGCTGAT CCGCGGCCGC
AGCCGGTTCT TCGACCTGCC GGAGCCGATG CTGGGCTTCA CCCGGACGCT CGACGGCCAG
TCGCTCGCCT GCTTCTTCAA CCTCGGCATC GAGCCGGTCT CGGCGACCCT GCCGGGCCAT
GGCGGGCTGA TCGGCCCGGC ACAGGCCGCC GTGCTCGAGG GAGACCGCCT CACCCTCGGG
GCGAACGGCT ATGCCTTCCT GCCGGCTCCG GAGGATGCCA GCGTCAGCTG A
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| Protein sequence | MSDWWRGSVT YQIYPRSFQD SDGDGVGDLR GIIERLDHVA WLGADAIWLS PIFPSPMEDM
GYDVSDYTAI HPLFGSMEDF DALLARAHEL GLKVIIDQVL SHSSSAHPFF RESRRSRDNP
KADWYVWADA QPDGSPPNNW LSVFGGSAWE WDAQRRQYYL HNFLISQPDF NFHNPEVQDW
LLDQMRFWLD RGVDGFRLDT VNFYFHDAEL RSNRPNPQNG PIPPVNAYDM QDHAFSKSRI
ENIAFLLRMR KLLDDYPDRA MVGEVADGLR GLAIMAEYTS GADRLHMAYT FEMLSRTFTA
GHFRSRIEEF FATAPHGWPC WAFSNHDVVR HATRWAGHGA EDDVARLAAA MLLSFEGSVS
LYQGEELGQT ETELLYEELT DPPGLRFWPE EKGRDGCRTP MVWDDGPAGG FTTGTPWLPV
KPPQLARNVA SQKGIPGSVL ETYRALLQFR RTQPALIRGR SRFFDLPEPM LGFTRTLDGQ
SLACFFNLGI EPVSATLPGH GGLIGPAQAA VLEGDRLTLG ANGYAFLPAP EDASVS
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