Gene Rsph17025_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4260 
Symbol 
ID5086439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp18160 
End bp18840 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID640485819 
Productperiplasmic binding protein 
Protein accessionYP_001170413 
Protein GI146280257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0815099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGGGA TCTGTCGTTC CCATATCGAG CCAGGGCACG GGTCCTGCAC CGCGCCGCCT 
TTCGGACCAG GGCCGGGACT GGAGGCGCCT CTTGAAGCCC GCTTCTTCCG AAAATCCCTG
CGGCTTCCCT CCTGCAGCCT CGACCGGCGC GTGCCTGCCG GAACCCCTTC AACCGGAGAG
CCCCATGGCC AAAGGCATGA ACATCCGCGG AAACCGGCAG ACGAAAAAGC CGAAACAGCC
GAAGAAGGCG CCCGCCGTCG TTACGGTGAC GCGCACCCAC ACGGCCTTGG CGCCGTCGTC
GGGCTCGGGG ACCCTGAAGA AGCCCTGAAC GGCACGACGC GGGATGGCGG GTGCATCCGC
CCGCGTCCCG GCGGCGGCCG GAATGTGCGC GAGACCACGG ACCTCGATGA CAGAACAAGG
AACAGCCATG CGATCCTCCA AGCCCGACCC CGTTCGCGCC GGCCCTGGTC ATGCCGCACA
GCGCGCCGAC GCTGCCTCCA AGGCAATTGT CGCCGCCGAA ACAGATGCGC GGAATGCGCA
GGTCGCGCGC CAGCGGGCCG CCCGGCTCGA ACGCGACGCG ACGCTCGCGG CCTTGCCCGC
GGCGCCCAAG CCGGTGCGGA AATCCGGCCG GAAATGACCG CCGTTCCCTG GGGAGCCGCC
CGGTTCGACC ACGGACAATG A
 
Protein sequence
MFGICRSHIE PGHGSCTAPP FGPGPGLEAP LEARFFRKSL RLPSCSLDRR VPAGTPSTGE 
PHGQRHEHPR KPADEKAETA EEGARRRYGD AHPHGLGAVV GLGDPEEALN GTTRDGGCIR
PRPGGGRNVR ETTDLDDRTR NSHAILQARP RSRRPWSCRT ARRRCLQGNC RRRNRCAECA
GRAPAGRPAR TRRDARGLAR GAQAGAEIRP EMTAVPWGAA RFDHGQ