Gene Rsph17025_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4258 
Symbol 
ID5086535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp16859 
End bp17065 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content64% 
IMG OID640485817 
Producthypothetical protein 
Protein accessionYP_001170411 
Protein GI146280255 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.321323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.982609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG GCACCGTGAA ATGGTTCAAC GCCACCAAAG GCTTCGGCTT CATTGCCCCG 
ACGGGCGGCT CGAAGGACGT GTTCGTTCAC GTCACCGCGC TTGAACGCGC CGGCATCCGG
CAGCTCAACG ACGGGCAGAC CGTCACCTTC GACCTCGAGC GTGACCGCAA CGGTCGCGAG
TCGGCGACGA ACCTCGTTCT CGCCTGA
 
Protein sequence
MANGTVKWFN ATKGFGFIAP TGGSKDVFVH VTALERAGIR QLNDGQTVTF DLERDRNGRE 
SATNLVLA