Gene Rsph17025_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3983 
Symbol 
ID5086158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand- 
Start bp9704 
End bp10324 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content74% 
IMG OID640485542 
Producthypothetical protein 
Protein accessionYP_001170142 
Protein GI146279985 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.117251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.595141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGCCGGGCCT TGCGTTCTGG AACCGGGTGG CCGACCGCTA TGCGGCGCGG 
CCCGTCCGCG AGCCGGAGGC CTACGAGGAC ACGCTCGCCC ATGTCGCCGC CCATCTTGCC 
CGCTCGGACC GGGTGCTGGA GATCGGCTGC GGCACCGGCA GCACCGCGCT GCGGCTCGGC 
GGCGGCGTGG CCCTCTGGCG GGCGACCGAC GCCTCGCCCG AGATGATCCG CATCGCCGGC 
GCGAAACCGG CGCCGGCCAG CGTCCGCTTC GCCCGGGCCG AGGCCGGAGA GGCCGTCGAG 
GGGGGTCCCT TCGACGTGGT CTGCGCCTTT CACCTCCTGC ATCTGGTGCC CGATCTCGAG 
GCGACGCTCG CCCGGATCCA TGCCCGTCTC GAGCCGGGTG GGCTCTTCAT CAGCAAGACC 
TGGTGCTTTG GCGACATGAG CCGGCGCCTG CGGCTGCTGA TCCCGCTCCT GCGGCTCTTC 
GGCCTGTTCC CGCCGGCCCG CGCGCTCACG GCCCGCGCGC TCCGCGAGGC CATCCGTGCG 
GCCGGCTTCG AGATCGAGGA CGAGCGCACC TTCGGCCGGA GCCGCCACGC CCCCTGCATC 
ATCGCCCGCA AGCCGGCCTG A
 
Protein sequence
MTDTPGLAFW NRVADRYAAR PVREPEAYED TLAHVAAHLA RSDRVLEIGC GTGSTALRLG 
GGVALWRATD ASPEMIRIAG AKPAPASVRF ARAEAGEAVE GGPFDVVCAF HLLHLVPDLE 
ATLARIHARL EPGGLFISKT WCFGDMSRRL RLLIPLLRLF GLFPPARALT ARALREAIRA 
AGFEIEDERT FGRSRHAPCI IARKPA