Gene Rsph17025_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3917 
Symbol 
ID5085465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp818350 
End bp818766 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content72% 
IMG OID640485475 
Productsulfur oxidation protein SoxY 
Protein accessionYP_001170076 
Protein GI146279918 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.326737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTTT CGAGACGAGA CACACTGGTG CTGGGCATGG GCGGCCTCGC GGCCCTGACG 
CTGCCGATGC CCGCGCTCGC GGCGGCCGAC GAGGCCATTG CCGCCTTCAC GGGCGGCGCG
GCCACGGGCA GCGGCGGCAT CACGCTGACC GCGCCCGAGA TCGCCGAGAA CGGCAACACC
GTGCCGGTCA CGGTGGATGC GCCCGGCGCT GCGGCGATCA TGCTGGTCGC GACCGGCAAT
CCGGAACCGG CGGTGGCGAC CTTCACCTTC GGCCCGGCCG CGGGCTCGCA GATGGCCGCC
ACGCGGATCC GGCTTGCCAA GACGCAGGAC GTGGTCGCCA TCGCGAGGAT GCCCGACGGC
AGCTTCGTTC AGGCAAGCGC CACGGTGAAG GTCACCATCG GCGGCTGCGG CGGCTGA
 
Protein sequence
MRLSRRDTLV LGMGGLAALT LPMPALAAAD EAIAAFTGGA ATGSGGITLT APEIAENGNT 
VPVTVDAPGA AAIMLVATGN PEPAVATFTF GPAAGSQMAA TRIRLAKTQD VVAIARMPDG
SFVQASATVK VTIGGCGG