| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3820 |
|---|
| Symbol | |
|---|
| ID | 5085361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 714324 |
|---|
| End bp | 715364 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640485374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169982 |
|---|
| Protein GI | 146279824 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.930447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTACT ATGCCGGCTT GGACGTTTCG CTGAGGGAGA TTTCGATCTG CGTCATTGAC
GCAGATGGCA AGAGCATTGC GCGAGGTTGT TGCCCAGCCG ACCCTGAGGG CGTCGCCGGG
TGGTTTCGCG CAAGGTCGCT GTCGCCAAAG CAGATCGTTC ATGAAAGCGG ACAGCTGTCG
ATTTGGCTTC AGCGCGGTTT GGAACGGCTG GGGCTTCCGT CCGTGTGCAT CGACGCCCGC
AAGGCGCACA AGAGCCTGTC AGCTCGCCCC AACAAATCCG ATGCCGCTGA CGCGGAAGGC
CTTGCGCAAC TGGCTCGCAC AGGGTGGTTC ACCCCTGTCC ACGTGCGCAG CGAGACATCC
GATGGGCTGC GTTGTCTGGT AGGTGCCCGT GCGCAGCTGA TCAGTCTCCG CAAGGACCTT
GAGGGCCACA TCCGAGGAAT TCTCAAGACC TTCGGCATCC GCCTGACGGG TATCGGGAAA
GGCGACCAGC GGCAGGTCTT TCGCGACCAA CTCGCCTCTG CGGGAGAGCG TGATCCAGTC
TTGCGCGCAA TCGCGGACGC GTTCATCTGC GCCCATGCCA CCATTTGCCA GGCGGCAGCG
GACCTTGATC GTGCCGTGAA AGAGAACGCT GAGAAGCATC CTGTTGCCCG CCGATTGATG
ACCATTCCCG GCGTCGGGCC CATCGTGTCG CTGAGCTTTG TCGCGCTGGT CGACGATCCT
GCGAGGTTTC GTCGGGCTGT TGATGTCGGC GCTTTTCTGG GCCTTACCCC TCGGCGATAT
CAGTCCGGAG AAATGGATTG GTCCGGACGT ATCTCGAGAT GCGGCGACAG GGCCATGCGA
AGCATGTTGT TCGAAGCCGC AACTGCTTTG ATCAGTCGAA CACGGCGGTT CTCTGCGCTG
AAAAGCTGGG CGGTCCGACT TGCTGGACGG CGAGGGTTTG CCAAGGCCGC CGTGGCCACC
TCGCGGAAAC TCGCAGTGCT GATGCTGACG CTCTGGAAAA ACGAGACCGA ATTCAAATGG
AAAGAGCGGG CCGTAGCCTG A
|
|---|
| Protein sequence | MDYYAGLDVS LREISICVID ADGKSIARGC CPADPEGVAG WFRARSLSPK QIVHESGQLS
IWLQRGLERL GLPSVCIDAR KAHKSLSARP NKSDAADAEG LAQLARTGWF TPVHVRSETS
DGLRCLVGAR AQLISLRKDL EGHIRGILKT FGIRLTGIGK GDQRQVFRDQ LASAGERDPV
LRAIADAFIC AHATICQAAA DLDRAVKENA EKHPVARRLM TIPGVGPIVS LSFVALVDDP
ARFRRAVDVG AFLGLTPRRY QSGEMDWSGR ISRCGDRAMR SMLFEAATAL ISRTRRFSAL
KSWAVRLAGR RGFAKAAVAT SRKLAVLMLT LWKNETEFKW KERAVA
|
|---|
| |