| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3669 |
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| Symbol | |
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| ID | 5085529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 564148 |
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| End bp | 566625 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640485227 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001169842 |
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| Protein GI | 146279684 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0157977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.798163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC TGCGCCGACA CCGCATCCTC ACGCGGATCT GGGCCTCGGA GTCCGGCTGG
CGCGGCTGGT TCACCACCGT GAACCACACG GATCTGGGGC GGATGTTCAT GTTTGCCTCC
GCCGTCTTCT TCCTGATCGG CGGCATCCTC GCCATGCTCA TCCGGGCGCA GCTTGCCAGC
CCCCGCTCGG CCTTCGTCGG CGCCGAGACC TACGCGCAGC TCTTCACGAT GCACGGAACC
ATCATGATGT TCCTGTTCGC GATCCCGCTG TTCGAGGGGC TGACGATCTA CCTCTTGCCC
AAGCTGCTGG GCTCGCGCGA TCTGGCCTAT CCGCGCCTGT CGGCCTACGG CTTCTGGTGC
TATGTGCTGG GCGGCTCGAT GCTGATCTTC GCGCTGCTGG CCGGGATCGC GCCCGACAGC
GGCTGGTTCA TGTATCCGCC CCTGGCCTCC ACACTCGGCT CGCCGGGGAT CAACTCGGAC
TTCTGGCTGC TGGGGATCAC CTTCGTCGAG ATCTCGGCCA TCGCGGCGGC GGTCGAGATC
GTGGTGACGG TGCTGCGCTT CCGCGCGCCG GGCATGTCGC TCGACCGGAT GCCGATCTAC
GGCTGGTATG CGCTGGTCAC GGCCACCATG ATCCTGACAG GCTTTCCGCC GCTGATCCTC
GGCTCGATCC TGCTCGAGCT TGAGCGCGCC TTCGGCCTGC CCTTCTTCCA AGTGGCCGAG
GGTGGCGACA GCCTGCTGTG GCAGCATCTC TTCTGGCTCT TCGGCCATCC GGAGGTCTAT
ATCATCTTCC TGCCCGCGGC CGGTGCGATC TCCACCATCC TGCCCGTCAT GGCCCGGACC
GAACTGATGG GCTACCGCTG GGTGGTGGCC GCGGCGATCG CGCTCGCCGT CCTGAGCTTC
GGGCTCTGGG TGCACCACAT GTTCACCACG GGCATTCCGC ACATGGGGCT CGCGCTGTTC
TCGGCCGCCT CGACCCTCGT CGCGGTGCCG ACGGCGGTGC AGATCTTTGC CTGGATCGGG
ACGCTCTGGC GGGGCTCGCC GCAGATGCGG CTGCCGATGA TGTGGATCCT TGCCTTCTTC
GCCACCTTCG TCATCGGCGG GCTGACGGGC GTGATGGTGG CCGTCGTGCC GTTCGACTGG
CAGGTGCATG ACACGCATTT CATCGTGGCC CACCTGCACT ACGTCCTCGT GGGCGGCTTC
GTCTTCCCGA TGCTCGCCGC GCTCTACTAC TGGATGCCGC ATGTGACGGG GCGGAAGCGG
TTCTTCCGGG TGGGTGACGC CGCCTTCTGG CTGATCACGC TGGGCTTTCA CGCGACCTTC
CTGGCCGTCC ACTGGGTCGG GCTGCTCGGC CAGCGGCGCC GGACCGAGAC CTACGATCCC
GGTCAGGGGT GGGAGGTGAT CAATCTCATC TCCTCGATCG GCGGCTTCGT GATGGCGATC
GGCTTTGGCC TCGTGCTGCT GGACGTGGCG ATGAATGCGC TTGTGGCGGT GCGGGGCAGC
CGCAACCCGT GGCGCGCGGG CACGCTCGAA TGGGCGATGC CCACGCCGCC ACCGGCCTAC
AATTTTGCGA GCCTGCCAGA GGTTACCACG CGCGAGCCGC TGCACGAGGA TCCCGATCTC
GGGGTCAGGA TCGCGAAAGG CGAGTTCTAT CTTGGCGAGC CGCGGGGCGG CCGGCGCGAG
ACGCTGATGG TCGAGGTGGC CAGCGGAACG CCTGCGGCGC TGGTCGTCTA TCCCGGCAAC
AGCGCGCTGC CCTTCCAGCT CGCGCTTGCC ACGGGGCTCT TCTTCCTCGG GATGCTGCTG
AAGACCTTCT GGCTGGTGCC GCTGGCGCTT GCGGGCATCG CGGCCCTTGG CTGCCGCTGG
GTCTGGAGCC TCACCTCCAG CGGCGACGAG GGCCGTCTGC CGGTCGGCCG GGGCGAGAGC
CTGCCGCGAG AGGTGCCGGA CACGCCGGGA TGGTGGGGAT CGCTCTTCCT GCTTCTGGCC
GATGCGACGC TCTTCGGATC GCTGATGTTC GGCTATGCCT TCCTCTGGAC GGTGGCGCCG
AACTGGCCGC CGCCCGAGTG GCTGCAGCCC TCGATGCTCC TCATCGGACT TCTGCTTGGC
GGAGCGGCGA CCGCGCCGCT TCTGGTCCGC CTCGCGCTGC GGTCGGTCGC GGGCGGAGGC
TCTCCGACAC CCGCCTTGGC GGGAGCGTTG CTCGGCCTCG GCGCCCTGTC GGCGGCGGCG
CTGATGCTTC TCTTTGCGCT GCCCGTGCCC CAGCGCCACG CCTATGATGC AACGGTGTGG
GTAATCGGCG GCTATGCAGG CTTTCATGCG CTGCTCGCGC TGGGAATGAC GCTGTTCGTG
ATGGTCATGC AGGGCCGCGG CCGCCTCTCG GCCTTGCGGA TCGCGCCGCT CCGCATCCTG
CGGCTCTGGA TCGACTGGGC GGCCTTCGTC GGCCTCGTGG GTGTGGCCGC CGCCTGCCTG
CCGGGGGTTC TGGCATGA
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| Protein sequence | MNALRRHRIL TRIWASESGW RGWFTTVNHT DLGRMFMFAS AVFFLIGGIL AMLIRAQLAS
PRSAFVGAET YAQLFTMHGT IMMFLFAIPL FEGLTIYLLP KLLGSRDLAY PRLSAYGFWC
YVLGGSMLIF ALLAGIAPDS GWFMYPPLAS TLGSPGINSD FWLLGITFVE ISAIAAAVEI
VVTVLRFRAP GMSLDRMPIY GWYALVTATM ILTGFPPLIL GSILLELERA FGLPFFQVAE
GGDSLLWQHL FWLFGHPEVY IIFLPAAGAI STILPVMART ELMGYRWVVA AAIALAVLSF
GLWVHHMFTT GIPHMGLALF SAASTLVAVP TAVQIFAWIG TLWRGSPQMR LPMMWILAFF
ATFVIGGLTG VMVAVVPFDW QVHDTHFIVA HLHYVLVGGF VFPMLAALYY WMPHVTGRKR
FFRVGDAAFW LITLGFHATF LAVHWVGLLG QRRRTETYDP GQGWEVINLI SSIGGFVMAI
GFGLVLLDVA MNALVAVRGS RNPWRAGTLE WAMPTPPPAY NFASLPEVTT REPLHEDPDL
GVRIAKGEFY LGEPRGGRRE TLMVEVASGT PAALVVYPGN SALPFQLALA TGLFFLGMLL
KTFWLVPLAL AGIAALGCRW VWSLTSSGDE GRLPVGRGES LPREVPDTPG WWGSLFLLLA
DATLFGSLMF GYAFLWTVAP NWPPPEWLQP SMLLIGLLLG GAATAPLLVR LALRSVAGGG
SPTPALAGAL LGLGALSAAA LMLLFALPVP QRHAYDATVW VIGGYAGFHA LLALGMTLFV
MVMQGRGRLS ALRIAPLRIL RLWIDWAAFV GLVGVAAACL PGVLA
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