Gene Rsph17025_3667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3667 
Symbol 
ID5085527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp562458 
End bp562994 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID640485225 
Producthypothetical protein 
Protein accessionYP_001169840 
Protein GI146279682 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.290827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.787143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGCTG CGGGCTTGCC GGACATGATC GAGTTCCTCG GGCCGATCAT CCCGCACCTC 
AAGGCGCTGC ACATCTCGAT GCTCGTGATC TGGTGCGGAG GGCTCTTCGC CCTGCCGCTG
ATGCTGAGCC ACCACGACAA GGCAACGGGG CAGGCCGATT ATTCGCGCGT GCGCCGTGCG
ACCCACTACG GCTACACGCT GGTGGTGACA CCCGGCGCGG TGCTGGCCAT CGCCAGCGGC
ACCCTGCTGA TCTTCCTGCG CGAGGTCTTC GATCTGTGGA TGTTCGCCAA GCTCGTCTTC
GTGGCGCTGC TGGTGGCGTT CCATGCCTGG GTCGGCCACA CGCTCGTCAT CGTGGCCGAG
ACCGAGGGAA CGCACCGCGT CCCCCCGGCC ACAGGTCCCC TGCTGCTTCT GCTGGTGCCC
GTGCTCGGGA TCCTGACCCT CGTGCTCGCC AAGCCCGACC TCCAGGGGAT TCCGCTGCCC
GACTGGCTCC AGGAGCCTCT GGGCATTCAG CTTCCCTTCG ACGTTCCCAG CCGATAA
 
Protein sequence
MQAAGLPDMI EFLGPIIPHL KALHISMLVI WCGGLFALPL MLSHHDKATG QADYSRVRRA 
THYGYTLVVT PGAVLAIASG TLLIFLREVF DLWMFAKLVF VALLVAFHAW VGHTLVIVAE
TEGTHRVPPA TGPLLLLLVP VLGILTLVLA KPDLQGIPLP DWLQEPLGIQ LPFDVPSR