Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3664 |
Symbol | |
ID | 5085524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 558269 |
End bp | 558913 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485222 |
Product | hypothetical protein |
Protein accession | YP_001169837 |
Protein GI | 146279679 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.321126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTCT ACCGATCCGA ACGGACCGGC CCCGAGCCCG GAACGCTCGC GCTCCTCGCC GGGGCGGGAG TTGTCGCCGG CGTGACCGCC TGGGCCATCG CCAGGTCCCG GGAGAACCCT GTCGCCTACC GGCCGAACGA CGACGCTCCC GACCGCTCCG CCCGATCCTC GTTCCAGGAC GGACCAGCGC CCGCCGGCCG GACCGTGACC ATCAACCGGC CGCGCTCCGA ACTCTTCGCC TTCTGGCGCG ATTTCTCGAA CCTTCCCCGG TTCATGGAGT CGATCGAGCA TGTGACGGCC TTGGGGGATG TCAGCCGCTG GACCATCGCC ATGCCCCTCG GCCGGACCGC GACGCTCGAG ACCCGGATCA TCGAGGAGGT GCCGGACCGA CTGATCGCCT GGCGCTCGAC AGAGGCGTCG GACATCCGGG CGGAGGGGGC CGTGACGTTC CGCGACGCCC CCGCAGGGCG TGGAACCGAA GTCGAGGCCG TGGTGGCCTA CATTCCAACC GGAGGCGAGG TCGGCCGGAT GGTCTCGCGG CTCTTCCGCC TCGCCCCCGC CCTGCAGGGG CGGCGCGAAC TCCGCCGCTT CAAGATGCTG ATGGAGGCGG GCGAGATCGC CACCTCCCGC AACCGGAAGG ACTGA
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Protein sequence | MPLYRSERTG PEPGTLALLA GAGVVAGVTA WAIARSRENP VAYRPNDDAP DRSARSSFQD GPAPAGRTVT INRPRSELFA FWRDFSNLPR FMESIEHVTA LGDVSRWTIA MPLGRTATLE TRIIEEVPDR LIAWRSTEAS DIRAEGAVTF RDAPAGRGTE VEAVVAYIPT GGEVGRMVSR LFRLAPALQG RRELRRFKML MEAGEIATSR NRKD
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