Gene Rsph17025_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3659 
Symbol 
ID5085519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp550642 
End bp551814 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content67% 
IMG OID640485217 
Producthypothetical protein 
Protein accessionYP_001169832 
Protein GI146279674 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0638108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGCAGC AACGCCTCTT TCACGGACCA TCCATGCCCG ACACAGACCC CGCGCCCCGC 
CCGCCCAAGG ACCGCACGCT CGTTGCCCGC GTGCAGACCG GGGCGCTGGT CATCATCGCC
TTTGCGGTGG TGCTCTTCCT GCTGGTTCAG GCCCAGTTCA TCCTCATCTC GCTGGCCGTC
TCGGTCATTC TCTTCAGCCT GACGAGCGAT GCGATCGCGC TGGTCGGGCG CGTTCGCTTC
GGACCGGTCA AGATCCCCAA CTGGCTGGCC ACCAGCCTTG CGCTGCTGCT GCTGGCCACG
GTGCTCCTGT CGGTGGCGGC GGTCATCGTC TCGCAGGTCA ACACGGTGCT GCTGACCGCC
CTCAGCTACA GCGAACAGGC CCCTGCGGCC GTGGCGGCAA TCTTTTCGTG GCTTGGACAG
GATGCGGAAG AGGCGGTGCT CTCCTCGATC CGCGCCGTCG AGATCTCGGG CTACCTGCGG
ACACTGGCTG CGCAGGCGGG GGCGCTGATG CAGGCCACGG TTCTGGTGAT CCTGTTCGTG
GGGTTCCTCT TTGCGGAGCG GGTCTGGTTC CCGGTCAAGC TGCTCAACCT GATCGGAGAC
CCCGACCGCG CGCGGCGCGT CGAGGAGATC GTGGGCTCGA TCATGCGGCG GGTGAACCGC
TACCTGCTGG TCAAGACCCT GGTCAGCGCC ATCACCGGCC TGCTGGTCTG GGGCGTGGCC
CTGGCCTTCG GGCTCGACCT GGCGGCGCCG CTCGGGATGC TGACCTTCAT CCTGAATTTC
ATACCGAGCA TCGGCTCGAT CGTCTCGACG CTGCTGATCG TGCTGGTCGC ATTCGTGCAG
ACCGTCGATG TCGCCACCGC CCTGTCGCTG CTGGCCTTCG TGGGCGCGAT CCAGTTCATT
TGCGGCAACG TTCTCGATCC GATGCTGATG GGGAGGGCCC TGCAGCTCTC GTCCTTCGGC
ATCATCATCA GCCTGGCCTT CTGGGGTGCG GTCTGGGGGA TCCCGGGGAT GTTCCTGTCG
GTGCCGATCA TGGTGGCGCT GATGATCGTC AGCGCCGAGA TCGACCCGCT GCGGCCGATC
GCGGTGCTGC TTTCGCGGCA GGGGCTTGCC GTGCCGATGA GGCGCCAGCG GGCCGAGCCG
GTGCCGCCCA CCCGTCTGGA GCGGCGGGGC TGA
 
Protein sequence
MWQQRLFHGP SMPDTDPAPR PPKDRTLVAR VQTGALVIIA FAVVLFLLVQ AQFILISLAV 
SVILFSLTSD AIALVGRVRF GPVKIPNWLA TSLALLLLAT VLLSVAAVIV SQVNTVLLTA
LSYSEQAPAA VAAIFSWLGQ DAEEAVLSSI RAVEISGYLR TLAAQAGALM QATVLVILFV
GFLFAERVWF PVKLLNLIGD PDRARRVEEI VGSIMRRVNR YLLVKTLVSA ITGLLVWGVA
LAFGLDLAAP LGMLTFILNF IPSIGSIVST LLIVLVAFVQ TVDVATALSL LAFVGAIQFI
CGNVLDPMLM GRALQLSSFG IIISLAFWGA VWGIPGMFLS VPIMVALMIV SAEIDPLRPI
AVLLSRQGLA VPMRRQRAEP VPPTRLERRG