Gene Rsph17025_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3653 
Symbol 
ID5085512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp541388 
End bp542449 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID640485210 
Producthypothetical protein 
Protein accessionYP_001169826 
Protein GI146279668 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.101524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGGAG ACCGGCCGCC CCGAGCGGTC AAGCGCGCCG TCACCGTGAA GGATGTCGCC 
GCCGCCGCCA ATGTCTCGCG CGCGACGGCG GCGCGGGCAT TGAACGGATA CGGCTATGTC
GGCGACGAGG CTTCGCGCCG GGTTCAGGAA GCGGCGGAGC GGCTGGGCTA TCGCGGCAAC
CGCATCGCGC AGGCGCTGCG GCAGGGGCAG ATGCCGATCG TGGGCTTCGT GCCGGGCGAC
ATCCAGAACC CGTTCTTCGC CCGCGTGGCG CATGACATCG ACGCGGCGCT GCGGCGGAGC
CGACACAGCC TGCTCATCGC GAGCAGCGAG GAGAGTCTCG CGCAGGAGCA GAGCCTGCTC
GACAACCTGC GAGCGCTGAA CGTGCGCGGG ATGATCGTGG CGCCGGCCTC TGAAGGGGAC
AATCCGCATC TTCAGCGTCT TGTGCGCGAG CGGGTGCCGC TGGTGCTGAT CGACCGCGAA
TTGCCGGAGA TCGACTGCGA CAGCGTCACG GTGGACAACG AGGGTGGCGC GCGCGAGGCG
ATCGCCCTGC TGATCGCGAA TGGCCATCGG CGGATCGCGC TGATCCATGA CGAGTCGCGC
ATCGCCACGG CCCGGCAGCG GCGCGAGGGC TATCTGCGCG CGCTGGCCGA GGCGGGTCTC
CCGGTCGAGG AGGGGCTGAT CGCGGTGTCG CAATCGACGG TGGAGCATGC CATCGACGCC
ACGATCCGCC TCTTCAGCCG GCCCGAGCGG CCGACCGCGC TCTTCACCGT GGACAGCCTG
ATGACGACGG GGGCGCTGCT GGCGCTGCGC TCGATGGGTC TCGCCGTGCC GCGCGACGTG
TCGCTGATCG GGTTCGACGA TTTCGACCTC GCGACCTTCA CCGATCCGCA GATCACGGTG
GTGGCGCAGC CGGTGGGCCA GATCGGGCCG CTGGCCGTCG AGATGCTGCT CGAGCGAATC
CGCGGCAGCG ACGTGCCGGC GCGCCATGTG CGGTTTCCGA CGCGGCTGAT CGCGCGCGGT
TCGGTCGCGC GGGCAGATTT CGGGCGGCGC GCCTGCACTT AA
 
Protein sequence
MSGDRPPRAV KRAVTVKDVA AAANVSRATA ARALNGYGYV GDEASRRVQE AAERLGYRGN 
RIAQALRQGQ MPIVGFVPGD IQNPFFARVA HDIDAALRRS RHSLLIASSE ESLAQEQSLL
DNLRALNVRG MIVAPASEGD NPHLQRLVRE RVPLVLIDRE LPEIDCDSVT VDNEGGAREA
IALLIANGHR RIALIHDESR IATARQRREG YLRALAEAGL PVEEGLIAVS QSTVEHAIDA
TIRLFSRPER PTALFTVDSL MTTGALLALR SMGLAVPRDV SLIGFDDFDL ATFTDPQITV
VAQPVGQIGP LAVEMLLERI RGSDVPARHV RFPTRLIARG SVARADFGRR ACT