Gene Rsph17025_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3579 
Symbol 
ID5085731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp468546 
End bp469610 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content67% 
IMG OID640485137 
Producthypothetical protein 
Protein accessionYP_001169753 
Protein GI146279595 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAACG TCCAGATCAG CAACGTCGTC AAGCGTTATG GCGCAGTCCA GGTCATGCAC 
GGCGTCAATG TCGAGATCGA GGACGGCGAG TTCGTCGTCC TCGTGGGCCC TTCCGGCTGC
GGAAAATCCA CGCTGCTGCG GATGCTTGCG GGGCTCGAGC CGATCAGCGG CGGCACGATC
TCGATCGGCG GCCGGGTGGT CAACAACGTG ATCCCCAAGG ACCGGGACAT CGCCATGGTG
TTCCAGTCCT ACGCGCTTTA TCCGCACAAG ACGGTTTTCG ACAACATGGG CTTCCCGTTG
AAGATGGCGG GGCGGCCGAA GGAGGAGATC GAGACCAAGG TGCGCAAGGC GGCCGAGATC
CTCGACCTCA CGAAATATCT CGACCGCTAT CCCAAGGCGC TGTCGGGCGG GCAGCGCCAG
CGCGTCGCCA TGGGGCGCGC CATCGTGCGC GATCCGCAGG TGTTCCTCTT CGACGAGCCC
CTGTCGAACC TTGACGCCAA GCTGCGCGTG ACCATGCGGC TCGAGATCAA GGAGCTGCAC
CAGCGGCTGA AGACCACCAT CGTCTATGTG ACCCACGACC AGATCGAGGC CATGACCATG
GCCGACAAGA TCGTGGTCAT GCGCGACGGG CGGGTGGAGC AGATCGGCGC GCCGCTGGAC
CTCTACGACC AGCCGCAGAA CCTGTTCGTT GCGGGCTTCA TCGGCTCGCC CTCGATGAAC
TTCCTGCACG GGCGGGTGGC GGTGCGGGAC GGCCGCAGGC TGTTTGTCTC GGACCGCGGG
CTGGAACTGC CGTTGCCCGC CAGCGGGGCC GCGGACGGGC AGGGGGTGAC GCTGGGGATC
CGGCCCGAGC ATATCGAGAT CGGCGCGGGC GGGATTCCGG CCCGGGTGGC GGTGCTTGAG
CCGACAGGCT CGGAGACGCA GATCTTTGCG CGCGCCGAGG GGGGCGACCT GATCGACGCC
GTGGTGCGCG ACCGGATCGC CGCGAGGCCG GGCGACGAGA TCGGCTTCCT GATCGACCCG
GCGCGGATGC ACCTGTTCGA CCGTGACAGC GGCAAGCGGC TCTGA
 
Protein sequence
MANVQISNVV KRYGAVQVMH GVNVEIEDGE FVVLVGPSGC GKSTLLRMLA GLEPISGGTI 
SIGGRVVNNV IPKDRDIAMV FQSYALYPHK TVFDNMGFPL KMAGRPKEEI ETKVRKAAEI
LDLTKYLDRY PKALSGGQRQ RVAMGRAIVR DPQVFLFDEP LSNLDAKLRV TMRLEIKELH
QRLKTTIVYV THDQIEAMTM ADKIVVMRDG RVEQIGAPLD LYDQPQNLFV AGFIGSPSMN
FLHGRVAVRD GRRLFVSDRG LELPLPASGA ADGQGVTLGI RPEHIEIGAG GIPARVAVLE
PTGSETQIFA RAEGGDLIDA VVRDRIAARP GDEIGFLIDP ARMHLFDRDS GKRL