| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3576 |
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| Symbol | |
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| ID | 5085728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 463954 |
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| End bp | 466344 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640485134 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169750 |
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| Protein GI | 146279592 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.966885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCC GGATGCCCTT GATGAAGTTC ATGCCCGCCC TGACGCGACG AGCGCCGGAG
TTCGTCGCCG CCGTCTATGC CGTCCTCAGT GCGCTCTGGA TCCTGTTCAG CGACCGGACG
GTGGCGCTGC TGGCGGAGAA TCCGGCCGCC CATCATGCGG TGCAGACCTA CAAGGGGCTG
GGGTTCATCA CGGCCTCGTC GCTGGTGCTC TACCTCGTGC TGCGCAGTGC GTGGAGCGAG
CTGTCCGCCT CGAACGCCCG CCTGACCGAG GCGGAACGGC GGCTGGCGGA TGTGATCCGC
GGCGGCGAGG TGGGAACGTG GCAGTTCGAC CTCGGAACGG GGATCATCCT CATCAACGAC
CGCTGGGCCG AGCTGATCGG CTACAGCCGC TCCGACATCG AGCCGGTGAC GATCGAGTTC
TGGAACCGGA TCGTTCACCC GGAAGATCTG GCGCGAATGC GGGAAAGGCA TCTCCGGCAG
TTCGCCGAGG GCAATCATGT CCTCGCCAAC GAGATCCGCC TCCGGCACAG ACAGGGACAC
TGGGTCTGGA TCATGTCGCG CGGCCGCGTC ACGGGATTTT CGGCGGACGG CGCGCCGGTG
CTGATGTCGG GCGTCCACAT GGACATCTCG CGGCGCAAGG CACTCGAGGA CGAGTTGCAG
GTCGAGCGGA ATCTGCTTCG CCGCGTGATG GAGACCAGCG TCTCGGCCGT GCTCGCCTTT
GACGGGACGA ACAGGGTCAT CTTCGCCAAC CGCGAGGCCG AAGCGGTTCT CGGGGCACCG
GCCGAGCAAC TTGTCGGCCG CACCGTCGAC GATCCGGGCT GGGGCATCTC GGACGGCGAT
GGGTCCGAAC TGCCGCTGGG CCGGTATCCG GTCGTTCGCG CCGCCACCGA GAACAAGGTG
CTGCGCGGCC TTCGGCTGGA CGTGCAGCAT CCGCAAAAGG GCGCGCGGGT GCTCTCGGTC
AATGTGGCGC CGGTCGAGCA GGGCGACAGC CGGGTGCGCG TCGTGGCGGC CTTCACCGAC
GTGACCGAAC AGATCGAGGC CGAGCGGACG CTCGCCGCCG CGGCCGAGGA CGCCCTGTAT
CAGGCGCTGC ACGATCCCAT GACGCGGCTG CCCAACCGGG TGCTGTTTCG GGAATGCCTC
GAGGCGGCGG TGCGGCACGG GGGGCGTCTG GCGCTGATCT TCATCGACCT CGACAATTTC
AAGCAGATCA ACGACCGTTT CGGCCACTTC GTCGGTGACC GGGTGATCCT CGACGTCGGG
CGCAAGCTGG GGGCGGCCGT CCCGCCGGAC AGCACCGTCG CGCGGATCGG GGGTGATGAG
TTCACCGTGC TCGTCCCTCT CGCGGCGGAC GACAGCATCG AGGACAGGGT GGCGTCGCTC
GTCCGTGAGA TCGAGCAGCC CGTCACCGTC GAGGGCAACA TCTTCTACCT CACCGCCAGC
TTCGGGGTCA GCCTGTTTCC CGATGATGCG ACGGATGCCG ACACGATGGT CCGCAACGCC
GATCTGGCCA TGTATGCGGC CAAGGCGAAG GGGCGCAACC AGTGCGTCCG GTTCGACGCG
GCCCTGCGCG AGCAGAGTTC CCAGCTCGGC ATCCTGGGTC AGGGATTGCA GCGGGCGATC
AGGCAGCGGC ACCTCGAGCT TTACCTCCAG CCCAAGGTCG CCCTTTCGGA GGGGCGCCCG
ATCGTGGGGG CCGAGGCGCT TCTGCGCTGG AACGACCCGG AGCTGGGCAG CATCAGCCCC
GCGCGTTTCA TCCCGGTGGC CGAAAGCTGT GGCCTGATCC GCTCGCTCGA CCAGCATGTG
ACCGACCTGC TTTGCGAGCT GCTGGAGCGG TGGCGCGACA AGGGGCTTCA CCTGCCGGTC
TTCGTCAACA TCTCGGCCGA GACGCTCGCG TCGGAGGGCT TCGCCGACGG TTTCCTCGGC
AAGCTCGAGC GGCTGGCGAT CCCGCCCGCG CGCGTCGGGA TCGAGATCAC CGAGGGCTCG
CTGCTCGGGA CCAGTCACGT CACCCGAAGC AACGTCGGCC GCCTGACATC GGCCGGCATC
CCGCTCTCGG TCGATGACTT CGGGACCGGC TACTCCTCGC TGGGCTACCT GCACCGGCTC
GCACTGAGTG AACTCAAGAT CGACCGCAGC TTTGTGGCGC AGATCGGAAC CGGGCGTGAC
GGGGCCGAGG CCATCGTGCG CGCGGTGCTT GCGCTCGGCC GCGCCCTCGG GCTGCGGACG
GTGGCCGAGG GGGTGGAGAC CGGGTTTCAG TGCGACTGGC TGATCCGCGA GGGATGCGAT
CAGGCGCAGG GCTTCCTCTT CGGCCCGCCC GTGCCGGTGG CCGAGTTCGA ACGGCTGGTC
GCGGGCTGGC GGAGAGAGGT CTCTCCGCCA GCGCCGGCTC ATCTCAACTG A
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| Protein sequence | MQIRMPLMKF MPALTRRAPE FVAAVYAVLS ALWILFSDRT VALLAENPAA HHAVQTYKGL
GFITASSLVL YLVLRSAWSE LSASNARLTE AERRLADVIR GGEVGTWQFD LGTGIILIND
RWAELIGYSR SDIEPVTIEF WNRIVHPEDL ARMRERHLRQ FAEGNHVLAN EIRLRHRQGH
WVWIMSRGRV TGFSADGAPV LMSGVHMDIS RRKALEDELQ VERNLLRRVM ETSVSAVLAF
DGTNRVIFAN REAEAVLGAP AEQLVGRTVD DPGWGISDGD GSELPLGRYP VVRAATENKV
LRGLRLDVQH PQKGARVLSV NVAPVEQGDS RVRVVAAFTD VTEQIEAERT LAAAAEDALY
QALHDPMTRL PNRVLFRECL EAAVRHGGRL ALIFIDLDNF KQINDRFGHF VGDRVILDVG
RKLGAAVPPD STVARIGGDE FTVLVPLAAD DSIEDRVASL VREIEQPVTV EGNIFYLTAS
FGVSLFPDDA TDADTMVRNA DLAMYAAKAK GRNQCVRFDA ALREQSSQLG ILGQGLQRAI
RQRHLELYLQ PKVALSEGRP IVGAEALLRW NDPELGSISP ARFIPVAESC GLIRSLDQHV
TDLLCELLER WRDKGLHLPV FVNISAETLA SEGFADGFLG KLERLAIPPA RVGIEITEGS
LLGTSHVTRS NVGRLTSAGI PLSVDDFGTG YSSLGYLHRL ALSELKIDRS FVAQIGTGRD
GAEAIVRAVL ALGRALGLRT VAEGVETGFQ CDWLIREGCD QAQGFLFGPP VPVAEFERLV
AGWRREVSPP APAHLN
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