Gene Rsph17025_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3332 
Symbol 
ID5085823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp208874 
End bp209914 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content74% 
IMG OID640484901 
Producttransport system permease protein 
Protein accessionYP_001169518 
Protein GI146279360 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.3708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG GATCGCCATC CCCCACGGCG GTTGCGGCGC TGCGGCGGTC GGGCCGGGGC 
CGGCTCGTCT GGCTGGGCCT GTTGGCCGCG GGGCTGGTTC TGGCCTGCGC GCTGTCGGTG
ACGGTGGGCA CGCGCGGGGT GAACTGGCCG GACATCCTGG GAGGGCTCGC CGGACGAACG
GTGACGATCG GCGAGGCCGT CGTGGCGGTT CGGGTGCCGC GCACCCTGCT GGCCGTGCTG
GCCGGAGCGG CCCTTGGCCT CTCGGGGGCC GTCATGCAGG GGATCACGCG CAGCCCGCTC
GCCGATCCCG GCATCCTGGG CGTCAACGCC GGCGCGGCGA TGGCCGTGGT GCTCGGGATG
GCGTGGTTCG GGATGGAGAC GCTTTCGGCC CATCTGTGGA GCGCGATCCT GGGCGCGGCC
GCCGCGGCCT GTTTCGTCTA TGCGGTGGGA TCGCTCGGCC GCGGCGGCGC CACACCGCTC
AAGCTGGCGC TGGCGGGGGC CGCCACCACC ATTGCGGTCT CGTCGCTGAC GGTGGCGATC
ATCCTGCCGC GGGGCGACAT CGCGGGCAGC GTGCAGTCCT GGCAGGTCGG CGGCGTGGGC
GGCGCAAGCG CCGATGCGCT TGCGGCCATG CTGCCCTTCC TTGTCGCGGG CGGCGCCATC
AGCCTCTGGT CGGCGCGCAA CCTGAACATG CTCGCGCTCG GGGACGATGC GGCGGCCGGG
CTCGGGGTTC CGGTGGCGCT CAGCCGGTTG ATCGCGGCCG CGGGGGCGGT CCTGCTCTGT
GGCGCCACAA CGGCGATCTG CGGGCCGATC GGCTTCGTCG GGCTGGTCGT GCCCCATGTC
GGCCGGCTTC TGGTCGGCGT CGATCACCGC TGGCTGCTGC CGTTCGCGGC CCTGTCCGGG
GCGCTTCTGC TGACCCTGGC CGATGTGCTG GGCCGCATCG CGGCGCGGCC CGGAGAGCTG
GACGTCGGCA TCGTGACCGC CTTTGCCGGG GCGCCGGTCT TCATCTGGAT TGTCCGGCGC
CGGAGGATCC GCGAGCTGTG A
 
Protein sequence
MSRGSPSPTA VAALRRSGRG RLVWLGLLAA GLVLACALSV TVGTRGVNWP DILGGLAGRT 
VTIGEAVVAV RVPRTLLAVL AGAALGLSGA VMQGITRSPL ADPGILGVNA GAAMAVVLGM
AWFGMETLSA HLWSAILGAA AAACFVYAVG SLGRGGATPL KLALAGAATT IAVSSLTVAI
ILPRGDIAGS VQSWQVGGVG GASADALAAM LPFLVAGGAI SLWSARNLNM LALGDDAAAG
LGVPVALSRL IAAAGAVLLC GATTAICGPI GFVGLVVPHV GRLLVGVDHR WLLPFAALSG
ALLLTLADVL GRIAARPGEL DVGIVTAFAG APVFIWIVRR RRIREL